Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene ID	`TkA08G350480`
Query reference	TK1151
Location	Chr08:89818888-89824258 (+)
Description	Similar to PAO1: Polyamine oxidase 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_034075 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 14 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g13700`	Flavoenzyme involved in polyamine back-conversion.	Heterologous expression and biochemical characterization of a polyamine oxidase from Arabidopsis involved in polyamine back conversion.2006 · DOI: 10.1104/pp.106.080911 Characterization of five polyamine oxidase isoforms in Arabidopsis thaliana.2010 · DOI: 10.1007/s00299-010-0881-1 Functional diversity inside the Arabidopsis polyamine oxidase gene family.2011 · DOI: 10.1093/jxb/erq341 Reducing Cytoplasmic Polyamine Oxidase Activity in Arabidopsis Increases Salt and Drought Tolerance by Reducing Reactive Oxygen Species Production and Increasing Defense Gene Expression.2016 · DOI: 10.3389/fpls.2016.00214
`At2g43020`	Flavoenzyme involved in polyamine back-conversion.	Characterization of five polyamine oxidase isoforms in Arabidopsis thaliana.2010 · DOI: 10.1007/s00299-010-0881-1 Functional diversity inside the Arabidopsis polyamine oxidase gene family.2011 · DOI: 10.1093/jxb/erq341 POLYAMINE OXIDASE2 of Arabidopsis contributes to ABA mediated plant developmental processes.2015 · DOI: 10.1016/j.plaphy.2015.08.003

Rice

Reference gene ID	Possible function	Papers / DOI
`Os09g0368200`	Flavoenzyme involved in polyamine back-conversion (By similarity).	No verified direct reference in this release
`Os09g0368500`	Flavoenzyme involved in polyamine back-conversion.	Polyamine oxidase 7 is a terminal catabolism-type enzyme in Oryza sativa and is specifically expressed in anthers.2014 · DOI: 10.1093/pcp/pcu047

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006598	polyamine catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.794; coverage=85.832; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046203	spermidine catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.561; coverage=87.885; evalue=1.51e-130; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046208	spermine catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.794; coverage=85.832; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathway	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1903602	thermospermine catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.696; coverage=93.224; evalue=1.23e-141; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005739	mitochondrion	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.794; coverage=85.832; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009505	plant-type cell wall	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.461; coverage=93.018; evalue=8.6e-147; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048046	apoplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.461; coverage=93.018; evalue=8.6e-147; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046592	polyamine oxidase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.794; coverage=85.832; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0050660	flavin adenine dinucleotide binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.794; coverage=85.832; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0052897	N8-acetylspermidine:oxygen oxidoreductase (propane-1,3-diamine-forming) activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.461; coverage=93.018; evalue=8.6e-147; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0052900	spermine oxidase (propane-1,3-diamine-forming) activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.461; coverage=93.018; evalue=8.6e-147; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0052901	spermine oxidase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.794; coverage=85.832; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0052903	N(1)-acetylpolyamine oxidase (3-acetamidopropanal-forming) activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.794; coverage=85.832; evalue=0.0; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990534	thermospermine oxidase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.794; coverage=85.832; evalue=0.0; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G13700	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=76.794; coverage=85.832; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os09g0368200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.696; coverage=93.224; evalue=1.23e-141	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os09g0368500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=45.561; coverage=87.885; evalue=1.51e-130	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	zma:541983	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=47.461; coverage=93.018; evalue=8.6e-147	UniProtKB/Swiss-Prot DAT 2026 current_release