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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA07G258020
Query referenceTK1151
LocationChr07:64541225-64544896 (-)
DescriptionSimilar to PLL4: Probable protein phosphatase 2C 23 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_000592 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 9 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g16560 Probable protein phosphatase 2C 40. No verified direct reference in this release
At1g07630 Involved in leaf development regulation.
POL and related phosphatases are dosage-sensitive regulators of meristem and organ development in Arabidopsis.2005 · DOI: 10.1016/j.ydbio.2005.06.020
At2g28890 Involved in leaf development regulation.
POL and related phosphatases are dosage-sensitive regulators of meristem and organ development in Arabidopsis.2005 · DOI: 10.1016/j.ydbio.2005.06.020

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0403701 Probable protein phosphatase 2C 39. No verified direct reference in this release
Os03g0821300 Protein phosphatase that acts on XA21 pathogen recognition receptor.
Rice XB15, a protein phosphatase 2C, negatively regulates cell death and XA21-mediated innate immunity.2008 · DOI: 10.1371/journal.pbio.0060231

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006952defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.139; coverage=103.597; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007165signal transductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.185; coverage=102.446; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048366leaf developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.185; coverage=102.446; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048827phyllome developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.139; coverage=103.597; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.185; coverage=102.446; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.185; coverage=102.446; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.139; coverage=103.597; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004722protein serine/threonine phosphatase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.185; coverage=102.446; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.185; coverage=102.446; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G07630KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.117; coverage=103.453; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G28890KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.185; coverage=102.446; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G09400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=50.0; coverage=103.309; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G02400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.907; coverage=103.165; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0821300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.139; coverage=103.597; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release