Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA07G186360 |
|---|---|
| Query reference | TK1151 |
| Location | Chr07:47433456-47433997 (+) |
| Description | Similar to GGB: Geranylgeranyl transferase type-1 subunit beta (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_024077 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 15 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g39550 |
Catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to a cysteine at the fourth position from the C-terminus of proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X (CaaX). | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0008284 | positive regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.984; coverage=44.853; evalue=1.37e-09; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009414 | response to water deprivation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.465; coverage=63.235; evalue=2.99e-24; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.465; coverage=63.235; evalue=2.99e-24; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009737 | response to abscisic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.465; coverage=63.235; evalue=2.99e-24; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009788 | negative regulation of abscisic acid-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.465; coverage=63.235; evalue=2.99e-24; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0018344 | protein geranylgeranylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.465; coverage=63.235; evalue=2.99e-24; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045787 | positive regulation of cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.984; coverage=44.853; evalue=1.37e-09; UniProt GO evidence=IMP:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080120 | CAAX-box protein maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.623; coverage=44.853; evalue=2.64e-10; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.465; coverage=63.235; evalue=2.99e-24; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005953 | CAAX-protein geranylgeranyltransferase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.465; coverage=63.235; evalue=2.99e-24; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004661 | protein geranylgeranyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.623; coverage=44.853; evalue=2.64e-10; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004662 | CAAX-protein geranylgeranyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.465; coverage=63.235; evalue=2.99e-24; UniProt GO evidence=IDA:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.623; coverage=44.853; evalue=2.64e-10; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.465; coverage=63.235; evalue=2.99e-24; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901363 | heterocyclic compound binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.984; coverage=44.853; evalue=1.37e-09; UniProt GO evidence=IDA:RGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G39550 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=60.465; coverage=63.235; evalue=2.99e-24 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:509322 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.623; coverage=44.853; evalue=2.93e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:5229 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.623; coverage=44.853; evalue=2.64e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:225467 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=39.344; coverage=44.853; evalue=3.44e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:81746 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.984; coverage=44.853; evalue=1.37e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release |