Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA07G147820 |
|---|---|
| Query reference | TK1151 |
| Location | Chr07:38131913-38143483 (+) |
| Description | Similar to NUP160: Nuclear pore complex protein NUP160 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_028371 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 19 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g33410 |
Contributes to the transfer of mature mRNA from the nucleus to the cytosol. |
A putative Arabidopsis nucleoporin, AtNUP160, is critical for RNA export and required for plant tolerance to cold stress.2006 · DOI: 10.1128/mcb.01063-06 A loss-of-function mutation in the nucleoporin AtNUP160 indicates that normal auxin signalling is required for a proper ethylene response in Arabidopsis.2012 · DOI: 10.1093/jxb/err424
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006406 | mRNA export from nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=24.717; coverage=34.686; evalue=1.18e-28; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006606 | protein import into nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.205; coverage=21.728; evalue=6.51e-14; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006913 | nucleocytoplasmic transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=24.717; coverage=34.686; evalue=1.18e-28; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.205; coverage=21.728; evalue=6.51e-14; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009733 | response to auxin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016973 | poly(A)+ mRNA export from nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032502 | developmental process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046822 | regulation of nucleocytoplasmic transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.205; coverage=21.728; evalue=6.51e-14; UniProt GO evidence=IMP:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048510 | regulation of timing of transition from vegetative to reproductive phase | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005635 | nuclear envelope | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005643 | nuclear pore | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=24.717; coverage=34.686; evalue=1.18e-28; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031080 | nuclear pore outer ring | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=24.717; coverage=34.686; evalue=1.18e-28; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031965 | nuclear membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017056 | structural constituent of nuclear pore | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G33410 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.645; coverage=99.476; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dme:Dmel_CG4738 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=26.205; coverage=21.728; evalue=6.51e-14 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:23279 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=24.717; coverage=34.686; evalue=1.18e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:59015 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.601; coverage=38.089; evalue=3.11e-28 | UniProtKB/Swiss-Prot DAT 2026 current_release |