RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDTkA07G080480
Query referenceTK1151
LocationChr07:21039454-21042755 (-)
DescriptionSimilar to MUR4: UDP-arabinose 4-epimerase 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_027627 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 12 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g20460 Probable UDP-arabinose 4-epimerase 3. No verified direct reference in this release
At1g30620 Acts as a UDP-D-xylose 4-epimerase but lacks both UDP-D- glucose and UDP-D-glucuronic acid 4-epimerase activities in vitro.
The biosynthesis of L-arabinose in plants: molecular cloning and characterization of a Golgi-localized UDP-D-xylose 4-epimerase encoded by the MUR4 gene of Arabidopsis.2003 · DOI: 10.1105/tpc.008425
At2g34850 Putative UDP-arabinose 4-epimerase 2. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0618200 Probable UDP-arabinose 4-epimerase 2. No verified direct reference in this release
Os07g0139400 Probable UDP-arabinose 4-epimerase 1. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006012galactose metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.756; coverage=99.515; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009793embryo development ending in seed dormancyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.805; coverage=99.515; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009832plant-type cell wall biogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.756; coverage=99.515; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019567arabinose biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.756; coverage=99.515; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0033358UDP-L-arabinose biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.756; coverage=99.515; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathwayUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045227capsule polysaccharide biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.756; coverage=99.515; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathwayUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048868pollen tube developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.805; coverage=99.515; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000138Golgi trans cisternaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.756; coverage=99.515; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005794Golgi apparatusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.756; coverage=99.515; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032580Golgi cisterna membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.756; coverage=99.515; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003978UDP-glucose 4-epimerase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.756; coverage=99.515; evalue=0.0; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050373UDP-arabinose 4-epimerase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.756; coverage=99.515; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G30620KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=79.756; coverage=99.515; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G34850KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=77.805; coverage=99.515; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G20460KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=79.805; coverage=99.757; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os07g0139400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=76.399; coverage=99.757; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release