Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA07G010230 |
|---|---|
| Query reference | TK1151 |
| Location | Chr07:2814956-2816969 (-) |
| Description | Similar to PBG1: Proteasome subunit beta type-4 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_031313 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 30 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g65420 |
Ycf20-like protein. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002376 | immune system process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006281 | DNA repair | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.0; coverage=64.56; evalue=4.27e-145; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006974 | DNA damage response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006979 | response to oxidative stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.205; coverage=60.165; evalue=4.77e-68; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007283 | spermatogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010498 | proteasomal protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.205; coverage=60.165; evalue=4.77e-68; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010499 | proteasomal ubiquitin-independent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030317 | flagellated sperm motility | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032743 | positive regulation of interleukin-2 production | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032760 | positive regulation of tumor necrosis factor production | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034341 | response to type II interferon | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.0; coverage=64.56; evalue=4.27e-145; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061136 | regulation of proteasomal protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.205; coverage=60.165; evalue=4.77e-68; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071357 | cellular response to type I interferon | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000045 | regulation of G1/S transition of mitotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000502 | proteasome complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.0; coverage=64.56; evalue=4.27e-145; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.0; coverage=64.56; evalue=4.27e-145; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.205; coverage=60.165; evalue=4.77e-68; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.0; coverage=64.56; evalue=4.27e-145; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.205; coverage=60.165; evalue=4.77e-68; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.0; coverage=64.56; evalue=4.27e-145; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005839 | proteasome core complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.0; coverage=64.56; evalue=4.27e-145; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019774 | proteasome core complex, beta-subunit complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.0; coverage=64.56; evalue=4.27e-145; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022626 | cytosolic ribosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.0; coverage=64.56; evalue=4.27e-145; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034515 | proteasome storage granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036064 | ciliary basal body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.205; coverage=60.165; evalue=4.77e-68; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001530 | lipopolysaccharide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.205; coverage=60.165; evalue=4.77e-68; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G56450 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.0; coverage=64.56; evalue=4.27e-145 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:506203 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=46.009; coverage=58.516; evalue=1.29e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:5692 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=45.161; coverage=59.615; evalue=2.6e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:19172 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=45.205; coverage=60.165; evalue=4.77e-68 | UniProtKB/Swiss-Prot DAT 2026 current_release |