Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA05G413680 |
|---|---|
| Query reference | TK1151 |
| Location | Chr05:102928084-102930244 (-) |
| Description | Similar to FIB1: rRNA 2'-O-methyltransferase fibrillarin 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_021648 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 34 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g52470 |
S-adenosyl-L-methionine-dependent methyltransferase that has the ability to methylate both RNAs and proteins (Probable). | |
At4g25630 |
S-adenosyl-L-methionine-dependent methyltransferase that has the ability to methylate both RNAs and proteins (Probable). | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000451 | rRNA 2'-O-methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000494 | box C/D sno(s)RNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.322; coverage=79.085; evalue=7.96e-164; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016074 | sno(s)RNA metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=74.689; coverage=78.758; evalue=3.15e-133; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016556 | mRNA modification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030490 | maturation of SSU-rRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=NAS:ComplexPortal | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031167 | rRNA methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042274 | ribosomal small subunit biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048254 | snoRNA localization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001650 | fibrillar center | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001651 | dense fibrillar component | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=74.689; coverage=78.758; evalue=3.15e-133; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001652 | granular component | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=IEA:Ensembl | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005694 | chromosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=74.689; coverage=78.758; evalue=3.15e-133; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.322; coverage=79.085; evalue=7.96e-164; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015030 | Cajal body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016592 | mediator complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.322; coverage=79.085; evalue=7.96e-164; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031428 | box C/D methylation guide snoRNP complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032040 | small-subunit processome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001094 | TFIID-class transcription factor complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004540 | RNA nuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.322; coverage=79.085; evalue=7.96e-164; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008649 | rRNA methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030515 | snoRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051117 | ATPase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=IPI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0180021 | U6 snRNA 2'-O-ribose methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990259 | histone H2AQ104 methyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G25630 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.322; coverage=79.085; evalue=7.96e-164 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G52470 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=91.322; coverage=79.085; evalue=6.81e-164 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:2091 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=74.689; coverage=78.758; evalue=2.5e-133 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:14113 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=74.689; coverage=78.758; evalue=3.15e-133 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | rno:292747 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=74.689; coverage=78.758; evalue=3.29e-133 | UniProtKB/Swiss-Prot DAT 2026 current_release |