Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

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Gene ID	`TkA05G379110`
Query reference	TK1151
Location	Chr05:94186865-94188994 (+)
Description	Protein of unknown function
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009520 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 0 GO annotations and 0 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

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Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g68200`	Functions probably as a transcriptional factor that activates genes involved in secondary cell wall biosynthesis.	The Arabidopsis CALLOSE DEFECTIVE MICROSPORE1 gene is required for male fertility through regulating callose metabolism during microsporogenesis.2014 · DOI: 10.1104/pp.113.233387 Arabidopsis C3H14 and C3H15 have overlapping roles in the regulation of secondary wall thickening and anther development.2015 · DOI: 10.1093/jxb/erv060 The CCCH zinc finger protein C3H15 negatively regulates cell elongation by inhibiting brassinosteroid signaling.2022 · DOI: 10.1093/plphys/kiac046
`At1g66810`	Functions probably as a transcriptional factor that activates genes involved in secondary cell wall biosynthesis.	AtC3H14, a plant-specific tandem CCCH zinc-finger protein, binds to its target mRNAs in a sequence-specific manner and affects cell elongation in Arabidopsis thaliana.2014 · DOI: 10.1111/tpj.12667 Arabidopsis C3H14 and C3H15 have overlapping roles in the regulation of secondary wall thickening and anther development.2015 · DOI: 10.1093/jxb/erv060

Rice

Reference gene ID	Possible function	Papers / DOI
`Os01g0645000`	Zinc finger CCCH domain-containing protein 9.	No verified direct reference in this release
`Os05g0576300`	Zinc finger CCCH domain-containing protein 39.	No verified direct reference in this release
`Os03g0301500`	Putative zinc finger CCCH domain-containing protein 21.	No verified direct reference in this release