Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA05G002780 |
|---|---|
| Query reference | TK1151 |
| Location | Chr05:858620-867485 (+) |
| Description | Similar to At2g47680: DExH-box ATP-dependent RNA helicase DExH8 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_018888 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 27 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g47680 |
DExH-box ATP-dependent RNA helicase DExH8. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os01g0256800 |
Zinc finger CCCH domain-containing protein 4. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001731 | formation of translation preinitiation complex | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.321; coverage=59.134; evalue=6.9e-60; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007283 | spermatogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.262; coverage=54.382; evalue=5.77e-60; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.262; coverage=54.382; evalue=5.77e-60; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031047 | regulatory ncRNA-mediated gene silencing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.262; coverage=54.382; evalue=5.77e-60; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042255 | ribosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.321; coverage=59.134; evalue=6.9e-60; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045948 | positive regulation of translational initiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.321; coverage=59.134; evalue=6.9e-60; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051321 | meiotic cell cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.262; coverage=54.382; evalue=5.77e-60; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.082; coverage=98.416; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.262; coverage=54.382; evalue=5.77e-60; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.321; coverage=59.134; evalue=6.9e-60; UniProt GO evidence=HDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016282 | eukaryotic 43S preinitiation complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.321; coverage=59.134; evalue=6.9e-60; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0022627 | cytosolic small ribosomal subunit | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.321; coverage=59.134; evalue=6.9e-60; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.082; coverage=98.416; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003678 | DNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.082; coverage=98.416; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.082; coverage=98.416; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003724 | RNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.082; coverage=98.416; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.082; coverage=98.416; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003743 | translation initiation factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.321; coverage=59.134; evalue=6.9e-60; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004386 | helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.082; coverage=98.416; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.082; coverage=98.416; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.082; coverage=98.416; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008494 | translation activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.321; coverage=59.134; evalue=6.9e-60; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016787 | hydrolase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=53.556; coverage=97.994; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.082; coverage=98.416; evalue=0.0; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017111 | ribonucleoside triphosphate phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.321; coverage=59.134; evalue=6.9e-60; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043024 | ribosomal small subunit binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.321; coverage=59.134; evalue=6.9e-60; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045296 | cadherin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.115; coverage=64.52; evalue=1.43e-58; UniProt GO evidence=HDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | aag:5577484 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.262; coverage=54.382; evalue=5.77e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G47680 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.082; coverage=98.416; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:54505 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.115; coverage=64.52; evalue=1.43e-58 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:218629 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.321; coverage=59.134; evalue=6.9e-60 | UniProtKB/Swiss-Prot DAT 2026 current_release |