Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA04G036730`
Query reference	TK1151
Location	Chr04:9830969-9832783 (-)
Description	Similar to GA2OX8: Gibberellin 2-beta-dioxygenase 8 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_036570 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 13 GO annotations and 7 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g21420`	Oxoglutarate-dependent dioxygenase involved in the biosynthesis of strigolactone natural products, bioactive compounds promoting plant fitness and soil microbe interactions, but preventing shoot branching.	No verified direct reference in this release
`At4g10500`	Converts salicylic acid (SA) to both 2,3-dihydroxybenzoic acid (2,3-DHBA) and 2,5-DHBA in vitro but only 2,3-DHBA in vivo.	DOWNY MILDEW RESISTANT 6 and DMR6-LIKE OXYGENASE 1 are partially redundant but distinct suppressors of immunity in Arabidopsis.2015 · DOI: 10.1111/tpj.12719

Rice

Reference gene ID	Possible function	Papers / DOI
`Os04g0522500`	Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins, leading to the homeostatic regulation of their endogenous level.	Activation of gibberellin 2-oxidase 6 decreases active gibberellin levels and creates a dominant semi-dwarf phenotype in rice (Oryza sativa L.).2010 · DOI: 10.1016/s1673-8527(09)60022-9
`Os07g0103500`	Catalyzes the 2-beta-hydroxylation of several biologically active gibberellins (GAs), leading to the homeostatic regulation of their endogenous level.	OsGA2ox5, a gibberellin metabolism enzyme, is involved in plant growth, the root gravity response and salt stress.2014 · DOI: 10.1371/journal.pone.0087110

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.615; coverage=92.068; evalue=1.96e-41; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009685	gibberellin metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.756; coverage=92.918; evalue=2.29e-51; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009686	gibberellin biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.756; coverage=92.918; evalue=2.29e-51; UniProt GO evidence=IEA:UniProtKB-UniPathway	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010336	gibberellic acid homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.952; coverage=95.184; evalue=2.06e-47; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045487	gibberellin catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.952; coverage=95.184; evalue=2.06e-47; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.952; coverage=95.184; evalue=2.06e-47; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.756; coverage=92.918; evalue=2.29e-51; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009507	chloroplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.615; coverage=92.068; evalue=1.96e-41; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.325; coverage=78.47; evalue=4.11e-30; UniProt GO evidence=ISS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.756; coverage=92.918; evalue=2.29e-51; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045543	gibberellin 2-beta-dioxygenase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.756; coverage=92.918; evalue=2.29e-51; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.756; coverage=92.918; evalue=2.29e-51; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051213	dioxygenase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.325; coverage=78.47; evalue=4.11e-30; UniProt GO evidence=IEA:UniProtKB-ARBA	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G50960	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.615; coverage=92.068; evalue=1.96e-41	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G21200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.756; coverage=92.918; evalue=2.29e-51	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G43450	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=30.325; coverage=78.47; evalue=4.11e-30	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os04g0522500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.952; coverage=95.184; evalue=2.06e-47	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os07g0103500	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.938; coverage=95.467; evalue=1.21e-41	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4336431	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.952; coverage=95.184; evalue=2.06e-47	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	osa:4342182	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.938; coverage=95.467; evalue=1.21e-41	UniProtKB/Swiss-Prot DAT 2026 current_release