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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Search Results

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Gene IDTkA03G415860
Query referenceTK1151
LocationChr03:103441390-103444401 (-)
DescriptionSimilar to MSI1: Histone-binding protein MSI1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_009286 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 71 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000122negative regulation of transcription by RNA polymerase IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IMP:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000209protein polyubiquitinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006260DNA replicationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.137; coverage=27.81; evalue=1.6e-08; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006281DNA repairBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.137; coverage=27.81; evalue=1.6e-08; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006310DNA recombinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.137; coverage=27.81; evalue=1.6e-08; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006325chromatin organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006335DNA replication-dependent chromatin assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006338chromatin remodelingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.137; coverage=27.81; evalue=1.6e-08; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.137; coverage=27.81; evalue=1.6e-08; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.137; coverage=27.81; evalue=1.6e-08; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006511ubiquitin-dependent protein catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006513protein monoubiquitinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006974DNA damage responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007095mitotic G2 DNA damage checkpoint signalingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007307eggshell chorion gene amplificationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IC:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007346regulation of mitotic cell cycleBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IMP:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007379segment specificationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IMP:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009411response to UVBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009555pollen developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009793embryo development ending in seed dormancyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009908flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009909regulation of flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010026trichome differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010214seed coat developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016480negative regulation of transcription by RNA polymerase IIIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019985translesion synthesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030308negative regulation of cell growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.556; coverage=42.857; evalue=5.65e-06; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031507heterochromatin formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034728nucleosome organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043161proteasome-mediated ubiquitin-dependent protein catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045787positive regulation of cell cycleBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045892negative regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IGI:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045893positive regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045944positive regulation of transcription by RNA polymerase IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048316seed developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048366leaf developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048511rhythmic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051726regulation of cell cycleBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070370cellular heat acclimationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.556; coverage=42.857; evalue=5.65e-06; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070828heterochromatin organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140718facultative heterochromatin formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IC:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000060positive regulation of ubiquitin-dependent protein catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000781chromosome, telomeric regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.556; coverage=42.857; evalue=5.65e-06; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000785chromatinCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005667transcription regulator complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IPI:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005677chromatin silencing complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.137; coverage=27.81; evalue=1.6e-08; UniProt GO evidence=IEA:EnsemblPlantsUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005694chromosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005700polytene chromosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005813centrosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016581NuRD complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016589NURF complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031464Cul4A-RING E3 ubiquitin ligase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031465Cul4B-RING E3 ubiquitin ligase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=ISS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031523Myb complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032991protein-containing complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0033186CAF-1 complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035097histone methyltransferase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035098ESC/E(Z) complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070176DRM complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.137; coverage=27.81; evalue=1.6e-08; UniProt GO evidence=IEA:EnsemblPlantsUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070822Sin3-type complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080008Cul4-RING E3 ubiquitin ligase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090575RNA polymerase II transcription regulator complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0001222transcription corepressor bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.137; coverage=27.81; evalue=1.6e-08; UniProt GO evidence=IEA:EnsemblPlantsUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.556; coverage=42.857; evalue=5.65e-06; UniProt GO evidence=IEA:EnsemblUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030674protein-macromolecule adaptor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031490chromatin DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042393histone bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.137; coverage=27.81; evalue=1.6e-08; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042803protein homodimerization activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IPI:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042826histone deacetylase bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06; UniProt GO evidence=IDA:FlyBaseUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G58230KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.159; coverage=24.0; evalue=2.69e-07UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdme:Dmel_CG4236KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=23.111; coverage=42.857; evalue=4.68e-06UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0640100KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.137; coverage=27.81; evalue=1.6e-08UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGgga:395390KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=23.556; coverage=42.857; evalue=5.65e-06UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGxtr:395039KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=23.699; coverage=65.905; evalue=1.45e-08UniProtKB/Swiss-Prot DAT 2026 current_release