Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA03G408870 |
|---|---|
| Query reference | TK1151 |
| Location | Chr03:101627274-101637921 (+) |
| Description | Similar to DCL4: Endoribonuclease Dicer homolog 4 (Oryza sativa subsp. japonica OX%3D39947) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_009204 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 35 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os04g0509300 |
Involved in the RNA silencing pathway. |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000911 | cytokinesis by cell plate formation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006353 | DNA-templated transcription termination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.708; coverage=71.111; evalue=5.46e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006396 | RNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009616 | RNAi-mediated antiviral immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.708; coverage=71.111; evalue=5.46e-15; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009880 | embryonic pattern specification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009908 | flower development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009944 | polarity specification of adaxial/abaxial axis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010050 | vegetative phase change | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.708; coverage=71.111; evalue=5.46e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010228 | vegetative to reproductive phase transition of meristem | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010267 | ta-siRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010492 | maintenance of shoot apical meristem identity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010599 | lsiRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.708; coverage=71.111; evalue=5.46e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030422 | siRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031053 | primary miRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=TAS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035196 | miRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.955; coverage=65.185; evalue=7.67e-08; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035279 | miRNA-mediated gene silencing by mRNA destabilization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044027 | negative regulation of gene expression via chromosomal CpG island methylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.708; coverage=71.111; evalue=5.46e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048317 | seed morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048608 | reproductive structure development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051214 | RNAi-mediated antiviral immunity against RNA virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.708; coverage=71.111; evalue=5.46e-15; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051607 | defense response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.708; coverage=71.111; evalue=5.46e-15; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000034 | regulation of seed maturation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.708; coverage=71.111; evalue=5.46e-15; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010445 | nuclear dicing body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0036464 | cytoplasmic ribonucleoprotein granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.708; coverage=71.111; evalue=5.46e-15; UniProt GO evidence=IDA:FlyBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=IDA:DisProt | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003725 | double-stranded RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004386 | helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004525 | ribonuclease III activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G01040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.294; coverage=50.37; evalue=2.99e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G80650 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=50.0; coverage=59.259; evalue=5.71e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G20320 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=42.708; coverage=71.111; evalue=5.46e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0121800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.955; coverage=65.185; evalue=7.67e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os04g0509300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=40.65; coverage=91.111; evalue=1.37e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release |