Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA03G025710`
Query reference	TK1151
Location	Chr03:6647617-6649597 (+)
Description	Similar to MYB30: Transcription factor MYB30 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_006284 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 29 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g28910`	Transcription factor that binds specifically to the DNA sequence 5'-AACAAAC-3'.	A novel myb oncogene homologue in Arabidopsis thaliana related to hypersensitive cell death.1999 · DOI: 10.1046/j.1365-313x.1999.00578.x A R2R3-MYB gene, AtMYB30, acts as a positive regulator of the hypersensitive cell death program in plants in response to pathogen attack.2002 · DOI: 10.1073/pnas.152047199 An essential role for salicylic acid in AtMYB30-mediated control of the hypersensitive cell death program in Arabidopsis.2006 · DOI: 10.1016/j.febslet.2006.05.027 A MYB transcription factor regulates very-long-chain fatty acid biosynthesis for activation of the hypersensitive cell death response in Arabidopsis.2008 · DOI: 10.1105/tpc.107.054858 Arabidopsis MYB30 is a direct target of BES1 and cooperates with BES1 to regulate brassinosteroid-induced gene expression.2009 · DOI: 10.1111/j.1365-313x.2008.03778.x AtsPLA2-alpha nuclear relocalization by the Arabidopsis transcription factor AtMYB30 leads to repression of the plant defense response.2010 · DOI: 10.1073/pnas.1009056107 Sumoylation of transcription factor MYB30 by the small ubiquitin-like modifier E3 ligase SIZ1 mediates abscisic acid response in Arabidopsis thaliana.2012 · DOI: 10.1073/pnas.1202630109 Elevated levels of MYB30 in the phloem accelerate flowering in Arabidopsis through the regulation of FLOWERING LOCUS T.2014 · DOI: 10.1371/journal.pone.0089799
`At3g47600`	Transcription activator involved in the activation of cuticular wax biosynthesis under drought stress.	Cuticular wax biosynthesis is up-regulated by the MYB94 transcription factor in Arabidopsis.2015 · DOI: 10.1093/pcp/pcu142 MYB94 and MYB96 Additively Activate Cuticular Wax Biosynthesis in Arabidopsis.2016 · DOI: 10.1093/pcp/pcw147
`At5g62470`	Transcription activator involved in the activation of cuticular wax biosynthesis under drought stress.	The MYB96 transcription factor mediates abscisic acid signaling during drought stress response in Arabidopsis.2009 · DOI: 10.1104/pp.109.144220 MYB96-mediated abscisic acid signals induce pathogen resistance response by promoting salicylic acid biosynthesis in Arabidopsis.2010 · DOI: 10.1111/j.1469-8137.2010.03183.x The MYB96 transcription factor regulates cuticular wax biosynthesis under drought conditions in Arabidopsis.2011 · DOI: 10.1105/tpc.111.083485 Lipid transfer protein 3 as a target of MYB96 mediates freezing and drought stress in Arabidopsis.2013 · DOI: 10.1093/jxb/ert040 The Arabidopsis MYB96 transcription factor plays a role in seed dormancy.2015 · DOI: 10.1007/s11103-015-0283-4 The Arabidopsis MYB96 Transcription Factor Is a Positive Regulator of ABSCISIC ACID-INSENSITIVE4 in the Control of Seed Germination.2015 · DOI: 10.1104/pp.15.00162 The MYB96-HHP module integrates cold and abscisic acid signaling to activate the CBF-COR pathway in Arabidopsis.2015 · DOI: 10.1111/tpj.12866 MYB96 shapes the circadian gating of ABA signaling in Arabidopsis.2016 · DOI: 10.1038/srep17754 MYB94 and MYB96 Additively Activate Cuticular Wax Biosynthesis in Arabidopsis.2016 · DOI: 10.1093/pcp/pcw147 MYB96 recruits the HDA15 protein to suppress negative regulators of ABA signaling in Arabidopsis.2019 · DOI: 10.1038/s41467-019-09417-1

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0001666	response to hypoxia	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006351	DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.72; coverage=107.43; evalue=1.16e-101; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006952	defense response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.856; coverage=107.43; evalue=1.11e-100; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009409	response to cold	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.856; coverage=107.43; evalue=1.11e-100; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009414	response to water deprivation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.72; coverage=107.43; evalue=1.16e-101; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009617	response to bacterium	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009626	plant-type hypersensitive response	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IEP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009644	response to high light intensity	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=55.328; coverage=75.542; evalue=3.57e-81; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009733	response to auxin	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009737	response to abscisic acid	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=55.328; coverage=75.542; evalue=3.57e-81; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009738	abscisic acid-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.856; coverage=107.43; evalue=1.11e-100; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009787	regulation of abscisic acid-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.856; coverage=107.43; evalue=1.11e-100; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.856; coverage=107.43; evalue=1.11e-100; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010100	negative regulation of photomorphogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010115	regulation of abscisic acid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.856; coverage=107.43; evalue=1.11e-100; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010118	stomatal movement	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=55.328; coverage=75.542; evalue=3.57e-81; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010468	regulation of gene expression	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.856; coverage=107.43; evalue=1.11e-100; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042761	very long-chain fatty acid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045893	positive regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.72; coverage=107.43; evalue=1.16e-101; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1904278	positive regulation of wax biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.72; coverage=107.43; evalue=1.16e-101; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:2000033	regulation of seed dormancy process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.856; coverage=107.43; evalue=1.11e-100; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000976	transcription cis-regulatory region binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003677	DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=51.988; coverage=101.238; evalue=2.08e-98; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0043565	sequence-specific DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.72; coverage=107.43; evalue=1.16e-101; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1990837	sequence-specific double-stranded DNA binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G28910	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.729; coverage=106.192; evalue=2.84e-103	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G47600	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=50.72; coverage=107.43; evalue=1.16e-101	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G62470	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=49.856; coverage=107.43; evalue=1.11e-100	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	vvi:100233072	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=55.328; coverage=75.542; evalue=3.57e-81	UniProtKB/Swiss-Prot DAT 2026 current_release