Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G611640 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:157771182-157773519 (-) |
| Description | Similar to PPH1: Protein phosphatase 2C 57 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_011815 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 27 GO annotations and 6 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g27800 |
Protein phosphatase specifically required for efficient dephosphorylation of the light-harvesting complex II outer antennae (LCHII) and transition from state 2 to state 1. | |
At3g51470 |
Probable protein phosphatase 2C 47. | No verified direct reference in this release |
At3g62260 |
Probable protein phosphatase 2C 49. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os01g0552300 |
Probable protein phosphatase 2C 5. | No verified direct reference in this release |
Os02g0799000 |
Probable protein phosphatase 2C 27. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006470 | protein dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.293; coverage=66.147; evalue=8.37e-32; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006499 | N-terminal protein myristoylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.293; coverage=66.147; evalue=8.37e-32; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007165 | signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009767 | photosynthetic electron transport chain | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016311 | dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032688 | negative regulation of interferon-beta production | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.293; coverage=66.147; evalue=8.37e-32; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035970 | peptidyl-threonine dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.293; coverage=66.147; evalue=8.37e-32; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043122 | regulation of canonical NF-kappaB signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.293; coverage=66.147; evalue=8.37e-32; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043124 | negative regulation of canonical NF-kappaB signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.293; coverage=66.147; evalue=8.37e-32; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050687 | negative regulation of defense response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.293; coverage=66.147; evalue=8.37e-32; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080005 | photosystem stoichiometry adjustment | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0090263 | positive regulation of canonical Wnt signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.293; coverage=66.147; evalue=8.37e-32; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901223 | negative regulation of non-canonical NF-kappaB signal transduction | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.293; coverage=66.147; evalue=8.37e-32; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.293; coverage=66.147; evalue=8.37e-32; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009570 | chloroplast stroma | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009579 | thylakoid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016020 | membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000287 | magnesium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004722 | protein serine/threonine phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016791 | phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030145 | manganese ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031625 | ubiquitin protein ligase binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.333; coverage=66.815; evalue=3.29e-31; UniProt GO evidence=IPI:WormBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.864; coverage=72.16; evalue=2.81e-32; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT3G51470 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=30.864; coverage=72.16; evalue=2.81e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G27800 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.471; coverage=94.655; evalue=6.59e-166 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cel:CELE_T23F11.1 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.333; coverage=66.815; evalue=3.29e-31 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os01g0552300 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.545; coverage=93.096; evalue=2.03e-152 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:19043 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=29.293; coverage=66.147; evalue=8.37e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | osa:4325851 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=54.545; coverage=93.096; evalue=2.03e-152 | UniProtKB/Swiss-Prot DAT 2026 current_release |