Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G308730 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:78572507-78575700 (-) |
| Description | Similar to LA1: La protein 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_015629 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 29 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g32720 |
Binds to the 3' poly(U) terminus of nascent RNA polymerase III transcripts, protecting them from exonuclease digestion and facilitating their folding and maturation. | No verified direct reference in this release |
At1g79880 |
Binds to the 3' poly(U) terminus of nascent RNA polymerase III transcripts, protecting them from exonuclease digestion and facilitating their folding and maturation. | No verified direct reference in this release |
At2g43970 |
Transcriptional regulator. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0001682 | tRNA 5'-leader removal | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=IGI:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006400 | tRNA modification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006409 | tRNA export from nucleus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=IMP:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008033 | tRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.475; coverage=54.451; evalue=1.03e-10; UniProt GO evidence=IMP:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008334 | histone mRNA metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=TAS:ProtInc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031126 | sno(s)RNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042254 | ribosome biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042780 | tRNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045727 | positive regulation of translation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071045 | nuclear histone mRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=IMP:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0075522 | IRES-dependent viral translational initiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903608 | protein localization to cytoplasmic stress granule | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=IDA:AgBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000781 | chromosome, telomeric region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=HDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=IDA:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009505 | plant-type cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010494 | cytoplasmic stress granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990904 | ribonucleoprotein complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000049 | tRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.475; coverage=54.451; evalue=1.03e-10; UniProt GO evidence=IDA:SGD | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008266 | poly(U) RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=IMP:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0017070 | U6 snRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.475; coverage=54.451; evalue=1.03e-10; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990825 | sequence-specific mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08; UniProt GO evidence=IMP:CAFA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G79880 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=39.11; coverage=88.406; evalue=1.2e-87 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G32720 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=51.264; coverage=90.062; evalue=4.24e-137 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:338071 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.176; coverage=98.965; evalue=5.8e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:6741 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=22.803; coverage=98.965; evalue=1.08e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | sce:YDL051W | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=25.475; coverage=54.451; evalue=1.03e-10 | UniProtKB/Swiss-Prot DAT 2026 current_release |