Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G150360 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:38714311-38715450 (-) |
| Description | Similar to MYB63: Transcription factor MYB63 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_016363 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 24 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g79180 |
Transcriptional activator that binds DNA to the AC cis-elements 5'-ACCTACC-3', 5'-ACCAACC-3' and 5'-ACCTAAC-3' of promoters and specifically activates lignin biosynthetic genes during secondary wall formation mediated by SND1. | |
At1g56160 |
Involved in metal ions homeostasis, including iron ions (Fe) acquisition, via the regulation of NAS4 and NAS2 genes expression. |
Expression differences for genes involved in lignin, glutathione and sulphate metabolism in response to cadmium in Arabidopsis thaliana and the related Zn/Cd-hyperaccumulator Thlaspi caerulescens.2008 · DOI: 10.1111/j.1365-3040.2007.01764.x MYB72 is required in early signaling steps of rhizobacteria-induced systemic resistance in Arabidopsis.2008 · DOI: 10.1104/pp.107.113829
|
At1g16490 |
Transcriptional activator that binds DNA to the AC cis-elements 5'-ACCTACC-3', 5'-ACCAACC-3' and 5'-ACCTAAC-3' of promoters and specifically activates lignin biosynthetic genes during secondary wall formation mediated by SND1. | |
At2g31180 |
Transcription activator that regulates freezing tolerance by affecting expression of CBF genes. |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002237 | response to molecule of bacterial origin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006351 | DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.172; coverage=45.669; evalue=7.25e-67; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009409 | response to cold | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.509; coverage=64.173; evalue=2.05e-62; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009411 | response to UV | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.172; coverage=45.669; evalue=7.25e-67; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009416 | response to light stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=79.31; coverage=45.669; evalue=9.23e-66; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009809 | lignin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.172; coverage=45.669; evalue=7.25e-67; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009866 | induced systemic resistance, ethylene mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010043 | response to zinc ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010447 | response to acidic pH | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019748 | secondary metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045893 | positive regulation of DNA-templated transcription | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.172; coverage=45.669; evalue=7.25e-67; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050826 | response to freezing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.509; coverage=64.173; evalue=2.05e-62; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051365 | cellular response to potassium ion starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098849 | cellular detoxification of cadmium ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1901141 | regulation of lignin biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=52.525; coverage=77.953; evalue=2.01e-62; UniProt GO evidence=IEA:UniProtKB-ARBA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990359 | stress response to zinc ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990532 | stress response to nickel ion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990641 | response to iron ion starvation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:2000652 | regulation of secondary cell wall biogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.172; coverage=45.669; evalue=7.25e-67; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.172; coverage=45.669; evalue=7.25e-67; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000976 | transcription cis-regulatory region binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.172; coverage=45.669; evalue=7.25e-67; UniProt GO evidence=IPI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003677 | DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003700 | DNA-binding transcription factor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.172; coverage=45.669; evalue=7.25e-67; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G16490 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=79.31; coverage=45.669; evalue=9.23e-66 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G56160 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=81.034; coverage=45.669; evalue=1.33e-65 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT1G79180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=80.172; coverage=45.669; evalue=7.25e-67 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT2G31180 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=59.509; coverage=64.173; evalue=2.05e-62 | UniProtKB/Swiss-Prot DAT 2026 current_release |