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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA02G097720
Query referenceTK1151
LocationChr02:25563623-25566793 (-)
DescriptionSimilar to MEKK1: Mitogen-activated protein kinase kinase kinase 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_016850 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 25 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At4g08500 The MEKK1, MKK1/MKK2 and MPK4 function in a signaling pathway that modulates the expression of genes responding to biotic and abiotic stresses and also plays an important role in pathogen defense by negatively regulating innate immunity.
MAP kinase signalling cascade in Arabidopsis innate immunity.2002 · DOI: 10.1038/415977a
The MKK2 pathway mediates cold and salt stress signaling in Arabidopsis.2004 · DOI: 10.1016/j.molcel.2004.06.023
Phosphorylation of Arabidopsis thaliana MEKK1 via Ca(2+) signaling as a part of the cold stress response.2013 · DOI: 10.1007/s10265-013-0576-0
At4g08480 Triggers SUMM2-mediated immune responses, including cell death and defense responses.
The MEKK1-MKK1/MKK2-MPK4 kinase cascade negatively regulates immunity mediated by a mitogen-activated protein kinase kinase kinase in Arabidopsis.2012 · DOI: 10.1105/tpc.112.097253
Glutamate signalling via a MEKK1 kinase-dependent pathway induces changes in Arabidopsis root architecture.2013 · DOI: 10.1111/tpj.12201
Deletion of a tandem gene family in Arabidopsis: increased MEKK2 abundance triggers autoimmunity when the MEKK1-MKK1/2-MPK4 signaling cascade is disrupted.2013 · DOI: 10.1105/tpc.113.112102
At4g08470 Mitogen-activated protein kinase kinase kinase 3. No verified direct reference in this release
At4g12020 Transcription factor. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000165MAPK cascadeBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006952defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=61.719; coverage=41.491; evalue=2.18e-100; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006970response to osmotic stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009409response to coldBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009611response to woundingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009631cold acclimationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009651response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010200response to chitinBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=61.719; coverage=41.491; evalue=2.18e-100; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010449root meristem growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0022622root system developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031347regulation of defense responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.33; coverage=60.94; evalue=9.9e-119; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045087innate immune responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046777protein autophosphorylationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1902065response to L-glutamateBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005768endosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004674protein serine/threonine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004707MAP kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.33; coverage=60.94; evalue=9.9e-119; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004709MAP kinase kinase kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019900kinase bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0106310protein serine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144; UniProt GO evidence=IEA:RHEAUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G08470KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=64.865; coverage=41.977; evalue=2.25e-113UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G08480KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=51.33; coverage=60.94; evalue=9.9e-119UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G08500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=46.35; coverage=95.462; evalue=8.81e-144UniProtKB/Swiss-Prot DAT 2026 current_release