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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA02G077850
Query referenceTK1151
LocationChr02:20275621-20278870 (+)
DescriptionSimilar to Xyl2: Beta-xylosidase/alpha-L-arabinofuranosidase 2 (Medicago sativa subsp. varia OX%3D36902)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_017044 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 11 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g64570 Beta-D-xylosidase showing an optimal efficiency with the natural substrate xylobiose. No verified direct reference in this release
At5g09730 Involved in the hydrolysis of arabinan.
Purification, functional characterization, cloning, and identification of mutants of a seed-specific arabinan hydrolase in Arabidopsis.2006 · DOI: 10.1093/jxb/erj205
At5g49360 Involved in pectic arabinan modification in mucilage secretory cells.
AtBXL1, a novel higher plant (Arabidopsis thaliana) putative beta-xylosidase gene, is involved in secondary cell wall metabolism and plant development.2003 · DOI: 10.1046/j.1365-313x.2003.01654.x
AtBXL1 encodes a bifunctional beta-D-xylosidase/alpha-L-arabinofuranosidase required for pectic arabinan modification in Arabidopsis mucilage secretory cells.2009 · DOI: 10.1104/pp.109.138388

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009627systemic acquired resistanceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.4; coverage=97.025; evalue=0.0; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031222arabinan catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.126; coverage=98.836; evalue=0.0; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045493xylan catabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.126; coverage=98.836; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050832defense response to fungusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.4; coverage=97.025; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005576extracellular regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.712; coverage=100.647; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009505plant-type cell wallCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.4; coverage=97.025; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.4; coverage=97.025; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.4; coverage=97.025; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048046apoplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.126; coverage=98.836; evalue=0.0; UniProt GO evidence=IEA:TreeGrafterUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009044xylan 1,4-beta-xylosidase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.126; coverage=98.836; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046556alpha-L-arabinofuranosidase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.126; coverage=98.836; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-ECUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G02640KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=52.687; coverage=98.706; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G09730KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=57.712; coverage=100.647; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G64570KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.4; coverage=97.025; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release