Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA02G017960 |
|---|---|
| Query reference | TK1151 |
| Location | Chr02:4232020-4235876 (-) |
| Description | Similar to RPM1: Disease resistance protein RPM1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_017658 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 20 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g07040 |
Disease resistance (R) protein that specifically recognizes the AvrRpm1 type III effector avirulence protein from Pseudomonas syringae. | |
At5g35450 |
Disease resistance protein. | No verified direct reference in this release |
At5g43470 |
Disease resistance protein. | |
At3g50950 |
CC-NB-LRR receptor-like protein required for recognition of pathogenic bacteria type III effectors (T3E) such as Pseudomonas syringae HopZ1a and HopF2a and Xanthomonas campestris pv. campestris (Xcc) XopAC/AvrAC; this recognition requires ZED1-related kinases (e.g. PBL2, ZRK3 and ZED1/ZRK5). | |
At1g59620 |
Probable disease resistance protein. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002230 | positive regulation of defense response to virus by host | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002239 | response to oomycetes | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.449; coverage=102.208; evalue=4.36e-175; UniProt GO evidence=TAS:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009416 | response to light stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009611 | response to wounding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009626 | plant-type hypersensitive response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.449; coverage=102.208; evalue=4.36e-175; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009637 | response to blue light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009646 | response to absence of light | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009751 | response to salicylic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051607 | defense response to virus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051707 | response to other organism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071446 | cellular response to salicylic acid stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95; UniProt GO evidence=IEP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0098542 | defense response to other organism | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.449; coverage=102.208; evalue=4.36e-175; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.449; coverage=102.208; evalue=4.36e-175; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009536 | plastid | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0012505 | endomembrane system | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.449; coverage=102.208; evalue=4.36e-175; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.449; coverage=102.208; evalue=4.36e-175; UniProt GO evidence=IDA:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000166 | nucleotide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.449; coverage=102.208; evalue=4.36e-175; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.449; coverage=102.208; evalue=4.36e-175; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043531 | ADP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.449; coverage=102.208; evalue=4.36e-175; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G53350 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=27.117; coverage=102.98; evalue=1.24e-91 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G07040 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.449; coverage=102.208; evalue=4.36e-175 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G35450 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.948; coverage=101.987; evalue=3.45e-97 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G43470 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=27.546; coverage=102.98; evalue=1.11e-95 | UniProtKB/Swiss-Prot DAT 2026 current_release |