Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | TkA01G534000 |
|---|---|
| Query reference | TK1151 |
| Location | Chr01:134027184-134030347 (+) |
| Description | Similar to EXT3: Extensin-3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_001451 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.
This query returns 22 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0009664 | plant-type cell wall organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.089; coverage=46.384; evalue=4.57e-07; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010944 | negative regulation of transcription by competitive promoter binding | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031571 | mitotic G1 DNA damage checkpoint signaling | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0033629 | negative regulation of cell adhesion mediated by integrin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IDA:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043484 | regulation of RNA splicing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=21.951; coverage=33.884; evalue=8.96e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045944 | positive regulation of transcription by RNA polymerase II | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000785 | chromatin | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005615 | extracellular space | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=21.951; coverage=33.884; evalue=8.96e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005796 | Golgi lumen | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=TAS:Reactome | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009530 | primary cell wall | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.089; coverage=46.384; evalue=4.57e-07; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016324 | apical plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031982 | vesicle | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990904 | ribonucleoprotein complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=21.951; coverage=33.884; evalue=8.96e-07; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0002039 | p53 binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IPI:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003712 | transcription coregulator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=21.951; coverage=33.884; evalue=8.96e-07; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005199 | structural constituent of cell wall | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.089; coverage=46.384; evalue=4.57e-07; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G21310 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.089; coverage=46.384; evalue=4.57e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:389677 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=21.951; coverage=33.884; evalue=8.96e-07 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:4582 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=26.559; coverage=51.343; evalue=1.87e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release |