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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA01G214530
Query referenceTK1151
LocationChr01:54650582-54652080 (+)
DescriptionSimilar to REV3: DNA polymerase zeta catalytic subunit (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_028879 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 14 GO annotations and 1 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g67500 Catalytic subunit of the error prone DNA polymerase zeta.
Disruption of the AtREV3 gene causes hypersensitivity to ultraviolet B light and gamma-rays in Arabidopsis: implication of the presence of a translesion synthesis mechanism in plants.2003 · DOI: 10.1105/tpc.012369
Roles of Arabidopsis AtREV1 and AtREV7 in translesion synthesis.2005 · DOI: 10.1104/pp.105.060236
RAD5a and REV3 function in two alternative pathways of DNA-damage tolerance in Arabidopsis.2011 · DOI: 10.1016/j.dnarep.2011.04.009

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000724double-strand break repair via homologous recombinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006281DNA repairBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006974DNA damage responseBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009411response to UVBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010224response to UV-BBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042276error-prone translesion synthesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071494cellular response to UV-CBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016035zeta DNA polymerase complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000166nucleotide bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003887DNA-directed DNA polymerase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00515394 iron, 4 sulfur cluster bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G67500KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.0; coverage=39.894; evalue=1.22e-18UniProtKB/Swiss-Prot DAT 2026 current_release