Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`TkA01G098070`
Query reference	TK1151
Location	Chr01:24763161-24767423 (-)
Description	Similar to At5g02620: Ankyrin repeat-containing protein At5g02620 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_004910 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 24 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g02620`	Ankyrin repeat-containing protein At5g02620.	No verified direct reference in this release
`At2g01680`	Ankyrin repeat-containing protein At2g01680.	No verified direct reference in this release
`At3g12360`	Involved in salt stress tolerance.	ITN1, a novel gene encoding an ankyrin-repeat protein that affects the ABA-mediated production of reactive oxygen species and is involved in salt-stress tolerance in Arabidopsis thaliana.2008 · DOI: 10.1111/j.1365-313x.2008.03614.x
`At4g14400`	Dose-dependent activator of the defense response against virulent pathogens, including bacteria, fungi and oomycetes, that acts in a positive feedback loop with the defense signal salicylic acid (SA).	The gain-of-function Arabidopsis acd6 mutant reveals novel regulation and function of the salicylic acid signaling pathway in controlling cell death, defenses, and cell growth.1999 · DOI: 10.1105/tpc.11.9.1695 A role for salicylic acid and NPR1 in regulating cell growth in Arabidopsis.2001 · DOI: 10.1046/j.1365-313x.2001.01158.x ACD6, a novel ankyrin protein, is a regulator and an effector of salicylic acid signaling in the Arabidopsis defense response.2003 · DOI: 10.1105/tpc.015412 Structure-function analysis of the plasma membrane- localized Arabidopsis defense component ACD6.2005 · DOI: 10.1111/j.1365-313x.2005.02567.x Genetic analysis of acd6-1 reveals complex defense networks and leads to identification of novel defense genes in Arabidopsis.2009 · DOI: 10.1111/j.1365-313x.2009.03791.x Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana.2010 · DOI: 10.1038/nature09083 Salicylic acid signaling controls the maturation and localization of the arabidopsis defense protein ACCELERATED CELL DEATH6.2014 · DOI: 10.1093/mp/ssu072

Rice

Reference gene ID	Possible function	Papers / DOI
`Os01g0837000`	Involved in salt stress tolerance.	No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006887	exocytosis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=NAS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IDA:BHF-UCL	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007010	cytoskeleton organization	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=NAS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007165	signal transduction	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009651	response to salt stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.22; coverage=100.185; evalue=6.18e-127; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045199	maintenance of epithelial cell apical/basal polarity	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=TAS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0072659	protein localization to plasma membrane	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IMP:BHF-UCL	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.22; coverage=100.185; evalue=6.18e-127; UniProt GO evidence=IPI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.524; coverage=97.222; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005783	endoplasmic reticulum	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.524; coverage=97.222; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=TAS:Reactome	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005856	cytoskeleton	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=NAS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.524; coverage=97.222; evalue=0.0; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009898	cytoplasmic side of plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IDA:ARUK-UCL	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0014731	spectrin-associated cytoskeleton	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IDA:BHF-UCL	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0170014	ankyrin-1 complex	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005198	structural molecule activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=NAS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005200	structural constituent of cytoskeleton	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=TAS:ProtInc	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008093	cytoskeletal anchor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IDA:BHF-UCL	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019899	enzyme binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IPI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019903	protein phosphatase binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IPI:ARUK-UCL	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030507	spectrin binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IDA:ARUK-UCL	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0044325	transmembrane transporter binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051117	ATPase binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20; UniProt GO evidence=IPI:BHF-UCL	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G01680	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.296; coverage=91.481; evalue=1.18e-121	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G12360	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.22; coverage=100.185; evalue=6.18e-127	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G02620	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=57.524; coverage=97.222; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os01g0837000	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.335; coverage=99.63; evalue=7.21e-121	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	hsa:286	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=28.289; coverage=56.296; evalue=4.09e-20	UniProtKB/Swiss-Prot DAT 2026 current_release