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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA01G002790
Query referenceTK1151
LocationChr01:726272-731513 (-)
DescriptionSimilar to PLGG1: Plastidal glycolate/glycerate translocator 1%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_005993 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 17 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g32080 Glycolate/glycerate transporter required for photorespiration.
A chloroplast envelope membrane protein containing a putative LrgB domain related to the control of bacterial death and lysis is required for chloroplast development in Arabidopsis thaliana.2012 · DOI: 10.1111/j.1469-8137.2011.03867.x
Loss of the plastid envelope protein AtLrgB causes spontaneous chlorotic cell death in Arabidopsis thaliana.2012 · DOI: 10.1093/pcp/pcr180
At2g35550 Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. No verified direct reference in this release
At2g01930 Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes.
BASIC PENTACYSTEINE1, a GA binding protein that induces conformational changes in the regulatory region of the homeotic Arabidopsis gene SEEDSTICK.2005 · DOI: 10.1105/tpc.104.030130
At1g14685 Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. No verified direct reference in this release
At1g68120 Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os10g0114500 Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. No verified direct reference in this release
Os10g0115200 Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009658chloroplast organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009737response to abscisic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009853photorespirationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010118stomatal movementBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0012501programmed cell deathBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.915; coverage=25.497; evalue=3.62e-11; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019835cytolysisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.915; coverage=25.497; evalue=3.62e-11; UniProt GO evidence=IEA:UniProtKB-UniRuleUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031640killing of cells of another organismBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.915; coverage=25.497; evalue=3.62e-11; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042631cellular response to water deprivationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048527lateral root developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0097339glycolate transmembrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901975glycerate transmembrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.429; coverage=25.316; evalue=1.76e-12; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009706chloroplast inner membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009941chloroplast envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043879glycolate transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901974glycerate transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G32080KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=74.607; coverage=80.47; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGbsu:BSU38330KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=31.429; coverage=25.316; evalue=1.76e-12UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGsep:SE_2014KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.915; coverage=25.497; evalue=3.62e-11UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGser:SERP2027KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=31.206; coverage=25.497; evalue=1.25e-10UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGssp:SSP0461KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.915; coverage=25.497; evalue=3.16e-10UniProtKB/Swiss-Prot DAT 2026 current_release