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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDTkA01G000550
Query referenceTK1151
LocationChr01:127187-132790 (+)
DescriptionSimilar to TIC110: Protein TIC110%2C chloroplastic (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_036629 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

This query returns 9 GO annotations and 1 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g06950 Involved in protein precursor import into chloroplasts.
atTic110 functions as a scaffold for coordinating the stromal events of protein import into chloroplasts.2003 · DOI: 10.1074/jbc.m306367200
In vivo studies on the roles of Tic110, Tic40 and Hsp93 during chloroplast protein import.2005 · DOI: 10.1111/j.1365-313x.2004.02307.x
Arabidopsis tic110 is essential for the assembly and function of the protein import machinery of plastids.2005 · DOI: 10.1105/tpc.105.030700

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009658chloroplast organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.803; coverage=100.876; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045037protein import into chloroplast stromaBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.803; coverage=100.876; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005576extracellular regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.803; coverage=100.876; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.803; coverage=100.876; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.803; coverage=100.876; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009706chloroplast inner membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=62.451; coverage=100.097; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009941chloroplast envelopeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.803; coverage=100.876; evalue=0.0; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031897Tic complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.803; coverage=100.876; evalue=0.0; UniProt GO evidence=TAS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0061927TOC-TIC supercomplex ICellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.803; coverage=100.876; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G06950KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.803; coverage=100.876; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release