Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_039733`
Query reference	OH1004
Location	JAJTUU010000033.1:166404-167987 (-)
Description	Similar to IAMT1: Indole-3-acetate O-methyltransferase 1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_039733 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 15 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g55250`	Catalyzes the methylation of the free carboxyl end of the plant hormone indole-3-acetic acid (IAA).	An indole-3-acetic acid carboxyl methyltransferase regulates Arabidopsis leaf development.2005 · DOI: 10.1105/tpc.105.034959 The possible action mechanisms of indole-3-acetic acid methyl ester in Arabidopsis.2008 · DOI: 10.1007/s00299-007-0458-9
`At5g56300`	Methylates the carboxyl group of several gibberellins (GAs).	Methylation of gibberellins by Arabidopsis GAMT1 and GAMT2.2007 · DOI: 10.1105/tpc.106.044602
`At4g26420`	Methylates the carboxyl group of several gibberellins (GAs).	Methylation of gibberellins by Arabidopsis GAMT1 and GAMT2.2007 · DOI: 10.1105/tpc.106.044602

Rice

Reference gene ID	Possible function	Papers / DOI
`Os04g0665200`	Catalyzes the methylation of the free carboxyl end of the plant hormone indole-3-acetic acid (IAA).	Structural, biochemical, and phylogenetic analyses suggest that indole-3-acetic acid methyltransferase is an evolutionarily ancient member of the SABATH family.2008 · DOI: 10.1104/pp.107.110049

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0009851	auxin biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.923; coverage=100.777; evalue=0.0; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009856	pollination	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.922; coverage=99.741; evalue=6.09e-68; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009944	polarity specification of adaxial/abaxial axis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.923; coverage=100.777; evalue=0.0; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032259	methylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.923; coverage=100.777; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0140964	intracellular auxin homeostasis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.364; coverage=102.591; evalue=1.52e-177; UniProt GO evidence=IC:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000287	magnesium ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.923; coverage=100.777; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008168	methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.922; coverage=99.741; evalue=6.09e-68; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.923; coverage=100.777; evalue=0.0; UniProt GO evidence=IMP:TIGR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010341	gibberellin carboxyl-O-methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.802; coverage=99.482; evalue=1.41e-79; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042802	identical protein binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.923; coverage=100.777; evalue=0.0; UniProt GO evidence=IPI:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046872	metal ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.364; coverage=102.591; evalue=1.52e-177; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051749	indole acetic acid carboxyl methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.923; coverage=100.777; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0102117	gibberellin A9 carboxyl methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.209; coverage=100.259; evalue=8.02e-68; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0102118	gibberellin A4 carboxyl methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.802; coverage=99.482; evalue=1.41e-79; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0103007	indole-3-acetate carboxyl methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.923; coverage=100.777; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT4G26420	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=37.209; coverage=100.259; evalue=8.02e-68	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G55250	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.923; coverage=100.777; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G56300	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=38.802; coverage=99.482; evalue=1.41e-79	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	dosa:Os04g0665200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=61.364; coverage=102.591; evalue=1.52e-177	UniProtKB/Swiss-Prot DAT 2026 current_release