Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_039697 |
|---|---|
| Query reference | OH1004 |
| Location | JAJTUU010000028.1:81967-83924 (+) |
| Description | Similar to NUF2: Kinetochore protein NUF2 homolog (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_039697 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 30 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g61000 |
Acts as a component of the essential kinetochore-associated NDC80 complex, which is required for chromosome segregation and spindle checkpoint activity to ensure proper cell division. | |
At4g11920 |
Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). | |
At4g22910 |
Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). |
Arabidopsis anaphase-promoting complexes: multiple activators and wide range of substrates might keep APC perpetually busy.2005 · DOI: 10.4161/cc.4.8.1856
|
At5g13840 |
Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000070 | mitotic sister chromatid segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007052 | mitotic spindle organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008361 | regulation of cell size | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.388; coverage=15.858; evalue=7.77e-16; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009624 | response to nematode | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.469; coverage=15.858; evalue=1.18e-16; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009825 | multidimensional cell growth | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=65.306; coverage=15.858; evalue=3e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009877 | nodulation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.469; coverage=15.858; evalue=1.18e-16; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010091 | trichome branching | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=65.306; coverage=15.858; evalue=3e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010342 | endosperm cellularization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010492 | maintenance of shoot apical meristem identity | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.388; coverage=15.858; evalue=7.77e-16; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.469; coverage=15.858; evalue=1.18e-16; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030154 | cell differentiation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.469; coverage=15.858; evalue=1.18e-16; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031145 | anaphase-promoting complex-dependent catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.469; coverage=15.858; evalue=1.18e-16; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032877 | positive regulation of DNA endoreduplication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.388; coverage=15.858; evalue=7.77e-16; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042023 | DNA endoreduplication | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=65.306; coverage=15.858; evalue=3e-13; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045132 | meiotic chromosome segregation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051301 | cell division | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051315 | attachment of mitotic spindle microtubules to kinetochore | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051383 | kinetochore organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905786 | positive regulation of anaphase-promoting complex-dependent catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.469; coverage=15.858; evalue=1.18e-16; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005680 | anaphase-promoting complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.469; coverage=15.858; evalue=1.18e-16; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.388; coverage=15.858; evalue=7.77e-16; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005828 | kinetochore microtubule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031262 | Ndc80 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008017 | microtubule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010997 | anaphase-promoting complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.469; coverage=15.858; evalue=1.18e-16; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044877 | protein-containing complex binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990757 | ubiquitin ligase activator activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.469; coverage=15.858; evalue=1.18e-16; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G61000 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=55.932; coverage=38.188; evalue=3.06e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G11920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.388; coverage=15.858; evalue=7.77e-16 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G22910 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=65.306; coverage=15.858; evalue=3e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G13840 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=54.167; coverage=15.534; evalue=1.95e-11 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mtr:25493638 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=73.469; coverage=15.858; evalue=1.18e-16 | UniProtKB/Swiss-Prot DAT 2026 current_release |