Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_038642 |
|---|---|
| Query reference | OH1004 |
| Location | Chr09:47127893-47129695 (-) |
| Description | Similar to HI_1400: 5'-3' exoribonuclease (Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX%3D71421) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_038642 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 13 GO annotations and 7 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
No hit for this species in the current source table.
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000470 | maturation of LSU-rRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.319; coverage=59.909; evalue=1.93e-26; UniProt GO evidence=IDA:EcoCyc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000481 | maturation of 5S rRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.319; coverage=59.909; evalue=1.93e-26; UniProt GO evidence=IDA:EcoCyc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006364 | rRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.206; coverage=59.681; evalue=9.98e-29; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016311 | dephosphorylation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.292; coverage=65.604; evalue=2.94e-25; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030490 | maturation of SSU-rRNA | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.319; coverage=59.909; evalue=1.93e-26; UniProt GO evidence=IDA:EcoCyc | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000166 | nucleotide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.866; coverage=59.453; evalue=1.14e-32; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004534 | 5'-3' RNA exonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.866; coverage=59.453; evalue=1.14e-32; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008252 | nucleotidase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.319; coverage=59.909; evalue=1.93e-26; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0030145 | manganese ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.319; coverage=59.909; evalue=1.93e-26; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0035312 | 5'-3' DNA exonuclease activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.866; coverage=59.453; evalue=1.14e-32; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.866; coverage=59.453; evalue=1.14e-32; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0097657 | 3',5'-nucleotide bisphosphate phosphatase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.866; coverage=59.453; evalue=1.14e-32; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0102561 | phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.111; coverage=61.503; evalue=5.03e-20; UniProt GO evidence=IDA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | cvi:CV_1693 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=32.292; coverage=65.604; evalue=2.94e-25 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ecj:JW1258 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.319; coverage=59.909; evalue=1.93e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | eco:b1266 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.319; coverage=59.909; evalue=1.93e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ecoc:C3026_07420 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.319; coverage=59.909; evalue=1.93e-26 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ele:Elen_0235 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=31.111; coverage=61.503; evalue=5.03e-20 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hin:HI_1400 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=34.866; coverage=59.453; evalue=1.14e-32 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | stm:STM1721 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=33.206; coverage=59.681; evalue=9.98e-29 | UniProtKB/Swiss-Prot DAT 2026 current_release |