Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_038068 |
|---|---|
| Query reference | OH1004 |
| Location | Chr09:30714933-30717298 (+) |
| Description | Similar to At1g04970: Putative BPI/LBP family protein At1g04970 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_038068 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 33 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At1g04970 |
Putative BPI/LBP family protein At1g04970. | No verified direct reference in this release |
At3g20270 |
Putative BPI/LBP family protein At3g20270. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0002752 | cell surface pattern recognition receptor signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IDA:AgBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006869 | lipid transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.047; coverage=69.592; evalue=6.98e-22; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006968 | cellular defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008228 | opsonization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010468 | regulation of gene expression | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.148; coverage=93.469; evalue=6.8e-178; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015920 | lipopolysaccharide transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031663 | lipopolysaccharide-mediated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.047; coverage=69.592; evalue=6.98e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032490 | detection of molecule of bacterial origin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032496 | response to lipopolysaccharide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032720 | negative regulation of tumor necrosis factor production | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032757 | positive regulation of interleukin-8 production | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032760 | positive regulation of tumor necrosis factor production | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.047; coverage=69.592; evalue=6.98e-22; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034145 | positive regulation of toll-like receptor 4 signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.441; coverage=94.898; evalue=1.64e-25; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045087 | innate immune response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.441; coverage=94.898; evalue=1.64e-25; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050829 | defense response to Gram-negative bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.047; coverage=69.592; evalue=6.98e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050830 | defense response to Gram-positive bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.047; coverage=69.592; evalue=6.98e-22; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071222 | cellular response to lipopolysaccharide | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.047; coverage=69.592; evalue=6.98e-22; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071223 | cellular response to lipoteichoic acid | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903409 | reactive oxygen species biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.148; coverage=93.469; evalue=6.8e-178; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000325 | plant-type vacuole | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.148; coverage=93.469; evalue=6.8e-178; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005576 | extracellular region | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.148; coverage=93.469; evalue=6.8e-178; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005615 | extracellular space | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.148; coverage=93.469; evalue=6.8e-178; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.166; coverage=95.714; evalue=1.9e-105; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009986 | cell surface | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IDA:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048046 | apoplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.166; coverage=95.714; evalue=1.9e-105; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070062 | extracellular exosome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=HDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0001530 | lipopolysaccharide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.148; coverage=93.469; evalue=6.8e-178; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005102 | signaling receptor binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=ISS:BHF-UCL | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008289 | lipid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=23.441; coverage=94.898; evalue=1.64e-25; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015026 | coreceptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IPI:AgBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070891 | lipoteichoic acid binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071723 | lipopeptide binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21; UniProt GO evidence=IDA:AgBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G04970 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=54.148; coverage=93.469; evalue=6.8e-178 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G20270 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=38.166; coverage=95.714; evalue=1.9e-105 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:512242 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=24.047; coverage=69.592; evalue=6.98e-22 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:3929 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=22.883; coverage=89.184; evalue=1.25e-21 | UniProtKB/Swiss-Prot DAT 2026 current_release |