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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_037592
Query referenceOH1004
LocationChr09:15557691-15558785 (-)
DescriptionSimilar to CAB13: Chlorophyll a-b binding protein 13%2C chloroplastic (Solanum lycopersicum OX%3D4081)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_037592 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 21 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g54270 The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated.
The photosystem II light-harvesting protein Lhcb3 affects the macrostructure of photosystem II and the rate of state transitions in Arabidopsis.2009 · DOI: 10.1105/tpc.108.064006
Excitation energy transfer and charge separation are affected in Arabidopsis thaliana mutants lacking light-harvesting chlorophyll a/b binding protein Lhcb3.2015 · DOI: 10.1016/j.jphotobiol.2015.11.002

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009416response to light stimulusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.045; coverage=100.0; evalue=4.4e-180; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009635response to herbicideBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009644response to high light intensityBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009737response to abscisic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009765photosynthesis, light harvestingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=86.641; coverage=99.242; evalue=1.84e-169; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009768photosynthesis, light harvesting in photosystem IBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.045; coverage=100.0; evalue=4.4e-180; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009769photosynthesis, light harvesting in photosystem IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010119regulation of stomatal movementBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015979photosynthesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009507chloroplastCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009517PSII associated light-harvesting complex IICellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009522photosystem ICellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.045; coverage=100.0; evalue=4.4e-180; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009523photosystem IICellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.045; coverage=100.0; evalue=4.4e-180; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009534chloroplast thylakoidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009535chloroplast thylakoid membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.045; coverage=100.0; evalue=4.4e-180; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009579thylakoidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042651thylakoid membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016168chlorophyll bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.045; coverage=100.0; evalue=4.4e-180; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019904protein domain specific bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178; UniProt GO evidence=IPI:CAFAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.045; coverage=100.0; evalue=4.4e-180; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G54270KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=91.506; coverage=98.106; evalue=1.08e-178UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGghi:107954948KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=69.288; coverage=101.136; evalue=7.89e-124UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGsly:101243766KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=92.045; coverage=100.0; evalue=4.4e-180UniProtKB/Swiss-Prot DAT 2026 current_release