Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_037353 |
|---|---|
| Query reference | OH1004 |
| Location | Chr09:7298157-7300582 (+) |
| Description | Similar to UBP14: Ubiquitin carboxyl-terminal hydrolase 14 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_037353 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 21 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g20630 |
Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. | |
At3g58570 |
DEAD-box ATP-dependent RNA helicase 52. | No verified direct reference in this release |
At2g42520 |
DEAD-box ATP-dependent RNA helicase 37. | No verified direct reference in this release |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os07g0202100 |
DEAD-box ATP-dependent RNA helicase 52B. | No verified direct reference in this release |
Os03g0805200 |
DEAD-box ATP-dependent RNA helicase 37. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006508 | proteolysis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009734 | auxin-activated signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009793 | embryo development ending in seed dormancy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009965 | leaf morphogenesis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016579 | protein deubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042127 | regulation of cell population proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048767 | root hair elongation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071370 | cellular response to gibberellin stimulus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IGI:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005777 | peroxisome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.87; coverage=36.164; evalue=3.25e-35; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009507 | chloroplast | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.348; coverage=36.164; evalue=6.28e-38; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010494 | cytoplasmic stress granule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.87; coverage=36.164; evalue=3.25e-35; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003724 | RNA helicase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.348; coverage=36.164; evalue=6.28e-38; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003729 | mRNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.348; coverage=36.164; evalue=6.28e-38; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004843 | cysteine-type deubiquitinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.348; coverage=36.164; evalue=6.28e-38; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.348; coverage=36.164; evalue=6.28e-38; UniProt GO evidence=IEA:RHEA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061815 | Met1-linked polyubiquitin deubiquitinase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990450 | linear polyubiquitin binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G42520 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=60.87; coverage=36.164; evalue=3.25e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G20630 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=56.757; coverage=46.541; evalue=1.74e-42 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G58570 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=64.348; coverage=36.164; evalue=6.28e-38 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os03g0805200 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=67.0; coverage=31.447; evalue=9.14e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os07g0202100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=67.0; coverage=31.447; evalue=2.72e-35 | UniProtKB/Swiss-Prot DAT 2026 current_release |