Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_037181 |
|---|---|
| Query reference | OH1004 |
| Location | Chr09:1129367-1130828 (-) |
| Description | Similar to BRG3: Probable BOI-related E3 ubiquitin-protein ligase 3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_037181 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 22 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At3g12920 |
Probable E3 ubiquitin-protein ligase. | |
At1g79110 |
Probable E3 ubiquitin-protein ligase. | |
At5g45100 |
E3 ubiquitin-protein ligase involved in regulation of abiotic stress responses. | |
At4g19700 |
E3 ubiquitin-protein ligase involved in the regulation of pathogen and abiotic stress responses by facilitating degradation of MYB108/BOI. | No verified direct reference in this release |
At4g39050 |
Kinesin-like protein KIN-7D, mitochondrial. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006952 | defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.329; coverage=102.671; evalue=5.32e-71; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007018 | microtubule-based movement | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=12.166; evalue=3.74e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0009739 | response to gibberellin | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.702; coverage=84.57; evalue=3.72e-55; UniProt GO evidence=IEP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031347 | regulation of defense response | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=12.166; evalue=3.74e-06; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042742 | defense response to bacterium | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.702; coverage=84.57; evalue=3.72e-55; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043067 | regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.329; coverage=102.671; evalue=5.32e-71; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043069 | negative regulation of programmed cell death | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.702; coverage=84.57; evalue=3.72e-55; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.329; coverage=102.671; evalue=5.32e-71; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050832 | defense response to fungus | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.702; coverage=84.57; evalue=3.72e-55; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.329; coverage=102.671; evalue=5.32e-71; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.329; coverage=102.671; evalue=5.32e-71; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=12.166; evalue=3.74e-06; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005871 | kinesin complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=12.166; evalue=3.74e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005874 | microtubule | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=12.166; evalue=3.74e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003777 | microtubule motor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=12.166; evalue=3.74e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004842 | ubiquitin-protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.329; coverage=102.671; evalue=5.32e-71; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004869 | cysteine-type endopeptidase inhibitor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.702; coverage=84.57; evalue=3.72e-55; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=12.166; evalue=3.74e-06; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008017 | microtubule binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=12.166; evalue=3.74e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0008270 | zinc ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.329; coverage=102.671; evalue=5.32e-71; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=12.166; evalue=3.74e-06; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.329; coverage=102.671; evalue=5.32e-71; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT1G79110 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=41.758; coverage=108.012; evalue=1.43e-64 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT3G12920 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=41.329; coverage=102.671; evalue=5.32e-71 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G19700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=40.702; coverage=84.57; evalue=3.72e-55 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G39050 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=12.166; evalue=3.74e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT5G45100 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=41.896; coverage=97.033; evalue=1.52e-63 | UniProtKB/Swiss-Prot DAT 2026 current_release |