Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_036848 |
|---|---|
| Query reference | OH1004 |
| Location | Chr08:49135527-49142230 (+) |
| Description | Similar to At2g20420: Succinate--CoA ligase [ADP-forming] subunit beta%2C mitochondrial (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_036848 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 20 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g20420 |
Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. | No verified direct reference in this release |
At4g31600 |
Nucleotide-sugar transporter that transports UDP-glucose and UDP-galactose. |
Rice
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
Os02g0621700 |
Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. | No verified direct reference in this release |
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006099 | tricarboxylic acid cycle | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.351; coverage=56.545; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006104 | succinyl-CoA metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.351; coverage=56.545; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006105 | succinate metabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=86.538; coverage=56.14; evalue=0.0; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015786 | UDP-glucose transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048527 | lateral root development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0055085 | transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0072334 | UDP-galactose transmembrane transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0080147 | root hair cell development | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000139 | Golgi membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005739 | mitochondrion | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.351; coverage=56.545; evalue=0.0; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005794 | Golgi apparatus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042709 | succinate-CoA ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.351; coverage=56.545; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000287 | magnesium ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.351; coverage=56.545; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniRule | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0004775 | succinate-CoA ligase (ADP-forming) activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.351; coverage=56.545; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005459 | UDP-galactose transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005460 | UDP-glucose transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005507 | copper ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.351; coverage=56.545; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.351; coverage=56.545; evalue=0.0; UniProt GO evidence=HDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015297 | antiporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G20420 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=87.351; coverage=56.545; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ath:AT4G31600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=77.852; coverage=40.216; evalue=1.36e-155 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0271842 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=56.061; coverage=53.441; evalue=3.01e-151 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | dosa:Os02g0621700 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=86.396; coverage=56.545; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release |