Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_036781`
Query reference	OH1004
Location	Chr08:48248547-48250021 (+)
Description	Similar to COMT1: Caffeic acid 3-O-methyltransferase (Prunus dulcis OX%3D3755)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_036781 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 25 GO annotations and 1 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g54160`	Methylates OH residues of flavonoid compounds.	Functional expression of an Arabidopsis cDNA clone encoding a flavonol 3'-O-methyltransferase and characterization of the gene product.2000 · DOI: 10.1006/abbi.1999.1681 A new Arabidopsis thaliana mutant deficient in the expression of O-methyltransferase impacts lignins and sinapoyl esters.2003 · DOI: 10.1023/a:1023022825098 Insights into lignin primary structure and deconstruction from Arabidopsis thaliana COMT (caffeic acid O-methyl transferase) mutant Atomt1.2010 · DOI: 10.1039/c004817h The role of CCoAOMT1 and COMT1 in Arabidopsis anthers.2012 · DOI: 10.1007/s00425-011-1586-6 Caffeic acid O-methyltransferase is involved in the synthesis of melatonin by methylating N-acetylserotonin in Arabidopsis.2014 · DOI: 10.1111/jpi.12160 Cloning of Arabidopsis serotonin N-acetyltransferase and its role with caffeic acid O-methyltransferase in the biosynthesis of melatonin in vitro despite their different subcellular localizations.2014 · DOI: 10.1111/jpi.12181 Daily rhythms of phytomelatonin signaling modulate diurnal stomatal closure via regulating reactive oxygen species dynamics in Arabidopsis.2020 · DOI: 10.1111/jpi.12640 Melatonin Represses Oil and Anthocyanin Accumulation in Seeds.2020 · DOI: 10.1104/pp.20.00117

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006970	response to osmotic stress	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0007623	circadian rhythm	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009809	lignin biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=97.808; evalue=2.1e-134; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010344	seed oilbody biogenesis	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0010555	response to mannitol	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030187	melatonin biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031537	regulation of anthocyanin metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032259	methylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=97.808; evalue=2.1e-134; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0042428	serotonin metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048354	mucilage biosynthetic process involved in seed coat development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0051555	flavonol biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0090333	regulation of stomatal closure	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IMP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009506	plasmodesma	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009536	plastid	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008171	O-methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0017096	acetylserotonin O-methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030755	quercetin 3-O-methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0033799	myricetin 3'-O-methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046983	protein dimerization activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=97.808; evalue=2.1e-134; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0047763	caffeate O-methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=52.661; coverage=97.808; evalue=2.1e-134; UniProt GO evidence=IEA:UniProtKB-EC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0102822	flavone 3'-O-methyltransferase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G54160	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.98; coverage=97.808; evalue=3.53e-133	UniProtKB/Swiss-Prot DAT 2026 current_release