Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_036639 |
|---|---|
| Query reference | OH1004 |
| Location | Chr08:45816102-45820457 (-) |
| Description | Similar to HESO1: Protein HESO1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_036639 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 23 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At2g39740 |
Uridylates small RNAs to trigger their degradation. |
The Arabidopsis nucleotidyl transferase HESO1 uridylates unmethylated small RNAs to trigger their degradation.2012 · DOI: 10.1016/j.cub.2012.02.051 Methylation protects microRNAs from an AGO1-associated activity that uridylates 5' RNA fragments generated by AGO1 cleavage.2014 · DOI: 10.1073/pnas.1405083111
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006397 | mRNA processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010587 | miRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.011; coverage=52.29; evalue=8.82e-09; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016077 | sno(s)RNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=ISO:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031123 | RNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.011; coverage=52.29; evalue=8.82e-09; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034475 | U4 snRNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=ISO:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043634 | polyadenylation-dependent ncRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071035 | nuclear polyadenylation-dependent rRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071038 | TRAMP-dependent tRNA surveillance pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=ISO:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0071040 | nuclear polyadenylation-dependent antisense transcript catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=EXP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0140746 | siRNA catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990431 | priRNA 3'-end processing | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IMP:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000932 | P-body | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.011; coverage=52.29; evalue=8.82e-09; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.011; coverage=52.29; evalue=8.82e-09; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.011; coverage=52.29; evalue=8.82e-09; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031499 | TRAMP complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0003723 | RNA binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016779 | nucleotidyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.011; coverage=52.29; evalue=8.82e-09; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043023 | ribosomal large subunit binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050265 | RNA uridylyltransferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.011; coverage=52.29; evalue=8.82e-09; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990817 | poly(A) RNA polymerase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06; UniProt GO evidence=IDA:PomBase | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G39740 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=24.011; coverage=52.29; evalue=8.82e-09 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | spo:3361384 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=26.728; coverage=32.053; evalue=4.27e-06 | UniProtKB/Swiss-Prot DAT 2026 current_release |