Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene ID	`LXL04_036627`
Query reference	OH1004
Location	Chr08:45654381-45657025 (-)
Description	Similar to RDM4: RNA-directed DNA methylation 4 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_036627 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 5 GO annotations and 1 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At2g30280`	Probable regulatory factor for several RNA polymerases.	A conserved transcriptional regulator is required for RNA-directed DNA methylation and plant development.2009 · DOI: 10.1101/gad.1851809 RNA-directed DNA methylation and plant development require an IWR1-type transcription factor.2010 · DOI: 10.1038/embor.2009.246

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006355	regulation of DNA-templated transcription	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.593; coverage=85.942; evalue=1.21e-69; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009791	post-embryonic development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.593; coverage=85.942; evalue=1.21e-69; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0080188	gene silencing by siRNA-directed DNA methylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.593; coverage=85.942; evalue=1.21e-69; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.593; coverage=85.942; evalue=1.21e-69; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003700	DNA-binding transcription factor activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.593; coverage=85.942; evalue=1.21e-69; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT2G30280	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=42.593; coverage=85.942; evalue=1.21e-69	UniProtKB/Swiss-Prot DAT 2026 current_release