Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_036029 |
|---|---|
| Query reference | OH1004 |
| Location | Chr08:34375977-34377123 (+) |
| Description | Similar to ABCD1: ABC transporter D family member 1 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_036029 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 16 GO annotations and 1 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At4g39850 |
Contributes to the transport of fatty acids and their derivatives (acyl CoAs) across the peroxisomal membrane. |
Ped3p is a peroxisomal ATP-binding cassette transporter that might supply substrates for fatty acid beta-oxidation.2002 · DOI: 10.1093/pcp/pcf023 Acetate non-utilizing mutants of Arabidopsis: evidence that organic acids influence carbohydrate perception in germinating seedlings.2004 · DOI: 10.1007/s00438-004-0985-9
|
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0006635 | fatty acid beta-oxidation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IMP:TIGR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006744 | ubiquinone biosynthetic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0007031 | peroxisome organization | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0010030 | positive regulation of seed germination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015910 | long-chain fatty acid import into peroxisome | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015916 | fatty-acyl-CoA transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IMP:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016042 | lipid catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IMP:CACAO | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042760 | very long-chain fatty acid catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005777 | peroxisome | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005778 | peroxisomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046861 | glyoxysomal membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IDA:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005324 | long-chain fatty acid transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005524 | ATP binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015607 | ABC-type fatty-acyl-CoA transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IEA:UniProtKB-EC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016887 | ATP hydrolysis activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042626 | ATPase-coupled transmembrane transporter activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08; UniProt GO evidence=ISS:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT4G39850 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=78.788; coverage=22.0; evalue=2.06e-08 | UniProtKB/Swiss-Prot DAT 2026 current_release |