Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_035762 |
|---|---|
| Query reference | OH1004 |
| Location | Chr08:28419267-28422811 (-) |
| Description | Similar to At2g30600/At2g30610: BTB/POZ domain-containing protein At2g30600 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_035762 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 29 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
UniProt: Q8LEV3 |
May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000209 | protein polyubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006511 | ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.841; coverage=24.938; evalue=6.28e-15; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006895 | Golgi to endosome transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.946; coverage=20.72; evalue=1.55e-13; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.946; coverage=20.72; evalue=1.55e-13; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.896; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathway | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0032436 | positive regulation of proteasomal ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0042659 | regulation of cell fate specification | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045746 | negative regulation of Notch signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0045747 | positive regulation of Notch signaling pathway | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0051865 | protein autoubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.846; coverage=24.938; evalue=1.35e-13; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0070534 | protein K63-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.846; coverage=24.938; evalue=1.35e-13; UniProt GO evidence=IDA:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902882 | regulation of response to oxidative stress | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1903077 | negative regulation of protein localization to plasma membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=30.846; coverage=24.938; evalue=1.35e-13; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1905936 | regulation of germ cell proliferation | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18; UniProt GO evidence=IGI:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990390 | protein K33-linked ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.946; coverage=20.72; evalue=1.55e-13; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005634 | nucleus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.896; coverage=100.0; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005654 | nucleoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.841; coverage=24.938; evalue=6.28e-15; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005730 | nucleolus | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.841; coverage=24.938; evalue=6.28e-15; UniProt GO evidence=IDA:HPA | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.896; coverage=100.0; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005802 | trans-Golgi network | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.946; coverage=20.72; evalue=1.55e-13; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.946; coverage=20.72; evalue=1.55e-13; UniProt GO evidence=IEA:GOC | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016607 | nuclear speck | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0031463 | Cul3-RING ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.946; coverage=20.72; evalue=1.55e-13; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0048471 | perinuclear region of cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.946; coverage=20.72; evalue=1.55e-13; UniProt GO evidence=IEA:UniProtKB-SubCell | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019964 | type II interferon binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.946; coverage=20.72; evalue=1.55e-13; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0046872 | metal ion binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18; UniProt GO evidence=IEA:InterPro | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061630 | ubiquitin protein ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1990756 | ubiquitin-like ligase-substrate adaptor activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.946; coverage=20.72; evalue=1.55e-13; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT2G30600 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.896; coverage=100.0; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | cel:CELE_C34D4.14 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.444; coverage=22.333; evalue=2.32e-18 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | gga:425091 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.946; coverage=20.72; evalue=1.55e-13 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:25831 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=31.841; coverage=24.938; evalue=6.28e-15 | UniProtKB/Swiss-Prot DAT 2026 current_release |