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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_035671
Query referenceOH1004
LocationChr08:26807044-26807526 (-)
DescriptionSimilar to AGL36: Agamous-like MADS-box protein AGL36 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_035671 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 12 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g26650 Probable transcription factor. No verified direct reference in this release
At1g65300 Probable transcription factor involved in the development of gametophytes and seeds. No verified direct reference in this release
At5g27960 Probable transcription factor. No verified direct reference in this release
At1g65330 Probable transcription factor involved in the development of gametophytes and seeds.
The Polycomb-group protein MEDEA regulates seed development by controlling expression of the MADS-box gene PHERES1.2003 · DOI: 10.1101/gad.257403
At5g48670 Probable transcription factor.
AGL80 is required for central cell and endosperm development in Arabidopsis.2006 · DOI: 10.1105/tpc.106.040824

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.051; coverage=97.5; evalue=1.31e-17; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006357regulation of transcription by RNA polymerase IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.051; coverage=97.5; evalue=1.31e-17; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009793embryo development ending in seed dormancyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.615; coverage=81.25; evalue=4.7e-16; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045944positive regulation of transcription by RNA polymerase IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.051; coverage=97.5; evalue=1.31e-17; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.051; coverage=97.5; evalue=1.31e-17; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043078polar nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.593; coverage=73.75; evalue=1.82e-14; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090406pollen tubeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.615; coverage=81.25; evalue=4.7e-16; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.593; coverage=73.75; evalue=1.82e-14; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000978RNA polymerase II cis-regulatory region sequence-specific DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.051; coverage=97.5; evalue=1.31e-17; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000981DNA-binding transcription factor activity, RNA polymerase II-specificMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.051; coverage=97.5; evalue=1.31e-17; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.051; coverage=97.5; evalue=1.31e-17; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046983protein dimerization activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.051; coverage=97.5; evalue=1.31e-17; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G65300KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=30.968; coverage=96.875; evalue=1.44e-17UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G65330KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=34.615; coverage=81.25; evalue=4.7e-16UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G26650KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=32.051; coverage=97.5; evalue=1.31e-17UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G27960KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=32.692; coverage=97.5; evalue=2.39e-17UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G48670KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=35.593; coverage=73.75; evalue=1.82e-14UniProtKB/Swiss-Prot DAT 2026 current_release