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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_034779
Query referenceOH1004
LocationChr07:116510176-116515420 (+)
DescriptionSimilar to At1g03370: C2 and GRAM domain-containing protein At1g03370 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_034779 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 16 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g03370 C2 and GRAM domain-containing protein At1g03370. No verified direct reference in this release
At5g50170 C2 and GRAM domain-containing protein At5g50170. No verified direct reference in this release
At3g59660 Involved in proteolytic processing of BAG6.
Aspartyl Protease-Mediated Cleavage of BAG6 Is Necessary for Autophagy and Fungal Resistance in Plants.2016 · DOI: 10.1105/tpc.15.00626
At1g22610 Regulates flowering time under long days.
Characterization of Multiple C2 Domain and Transmembrane Region Proteins in Arabidopsis.2018 · DOI: 10.1104/pp.17.01144

Rice

Reference gene IDPossible functionPapers / DOI
Os05g0370600 Promotes nuclear translocation of the transcription factor OSH1, which directly suppresses the auxin biosynthetic gene YUCCA4 during the late development of anthers.
OsFTIP7 determines auxin-mediated anther dehiscence in rice.2018 · DOI: 10.1038/s41477-018-0175-0

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009663plasmodesma organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=10.733; evalue=1.34e-14; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009911positive regulation of flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=10.733; evalue=1.34e-14; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010228vegetative to reproductive phase transition of meristemBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=10.733; evalue=1.34e-14; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048574long-day photoperiodism, floweringBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=10.733; evalue=1.34e-14; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0050832defense response to fungusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.426; coverage=41.798; evalue=1.35e-25; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005576extracellular regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.426; coverage=41.798; evalue=1.35e-25; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.751; coverage=91.71; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=10.733; evalue=1.34e-14; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=10.733; evalue=1.34e-14; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.751; coverage=91.71; evalue=0.0; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=10.733; evalue=1.34e-14; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009511plasmodesmatal endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=10.733; evalue=1.34e-14; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010008endosome membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=10.733; evalue=1.34e-14; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016020membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.396; coverage=92.496; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016757glycosyltransferase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=10.733; evalue=1.34e-14; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.751; coverage=91.71; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G03370KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=61.751; coverage=91.71; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G22610KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=41.463; coverage=10.733; evalue=1.34e-14UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G59660KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=24.426; coverage=41.798; evalue=1.35e-25UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G50170KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=43.396; coverage=92.496; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release