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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_034050
Query referenceOH1004
LocationChr07:78037113-78039959 (-)
DescriptionSimilar to FKBP42: Peptidyl-prolyl cis-trans isomerase FKBP42 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_034050 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 33 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g21640 PPIases accelerate the folding of proteins (By similarity).
TWISTED DWARF1, a unique plasma membrane-anchored immunophilin-like protein, interacts with Arabidopsis multidrug resistance-like transporters AtPGP1 and AtPGP19.2003 · DOI: 10.1091/mbc.e02-10-0698
The ULTRACURVATA2 gene of Arabidopsis encodes an FK506-binding protein involved in auxin and brassinosteroid signaling.2004 · DOI: 10.1104/pp.103.032524
Arabidopsis immunophilin-like TWD1 functionally interacts with vacuolar ABC transporters.2004 · DOI: 10.1091/mbc.e03-11-0831
Immunophilin-like TWISTED DWARF1 modulates auxin efflux activities of Arabidopsis P-glycoproteins.2006 · DOI: 10.1074/jbc.m604604200
The ER-localized TWD1 immunophilin is necessary for localization of multidrug resistance-like proteins required for polar auxin transport in Arabidopsis roots.2010 · DOI: 10.1105/tpc.110.078360
Arabidopsis TWISTED DWARF1 regulates stamen elongation by differential activation of ABCB1,19-mediated auxin transport.2022 · DOI: 10.1093/jxb/erac185
Loss of Multiple ABCB Auxin Transporters Recapitulates the Major twisted dwarf 1 Phenotypes in Arabidopsis thaliana .2022 · DOI: 10.3389/fpls.2022.840260
At3g25230 PPIases accelerate the folding of proteins.
Arabidopsis immunophilins ROF1 (AtFKBP62) and ROF2 (AtFKBP65) exhibit tissue specificity, are heat-stress induced, and bind HSP90.2007 · DOI: 10.1007/s11103-006-9085-z
Arabidopsis ROF1 (FKBP62) modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs.2009 · DOI: 10.1111/j.1365-313x.2009.03878.x
At5g48570 PPIases accelerate the folding of proteins.
Involvement of Arabidopsis ROF2 (FKBP65) in thermotolerance.2010 · DOI: 10.1007/s11103-009-9561-3
Peptidyl-prolyl cis-trans isomerase ROF2 modulates intracellular pH homeostasis in Arabidopsis.2012 · DOI: 10.1111/j.1365-313x.2012.04921.x
Characterization of three Arabidopsis thaliana immunophilin genes involved in the plant defense response against Pseudomonas syringae.2014 · DOI: 10.1016/j.gene.2014.01.029

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006457protein foldingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006970response to osmotic stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009408response to heatBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009555pollen developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009611response to woundingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009644response to high light intensityBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009734auxin-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009845seed germinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010928regulation of auxin mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048229gametophyte developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048366leaf developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048439flower morphogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048443stamen developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048461flower structural organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051510regulation of unidimensional cell growthBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070370cellular heat acclimationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0090627plant epidermal cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901703protein localization involved in auxin polar transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000012regulation of auxin polar transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000325plant-type vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.117; coverage=84.384; evalue=1.26e-29; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005774vacuolar membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005783endoplasmic reticulumCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009536plastidCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.117; coverage=84.384; evalue=1.26e-29; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0071944cell peripheryCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003755peptidyl-prolyl cis-trans isomerase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=ISS:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005516calmodulin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032266phosphatidylinositol-3-phosphate bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0044183protein folding chaperoneMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080025phosphatidylinositol-3,5-bisphosphate bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G21640KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=70.685; coverage=100.0; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G25230KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.13; coverage=80.274; evalue=3.96e-31UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G48570KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.117; coverage=84.384; evalue=1.26e-29UniProtKB/Swiss-Prot DAT 2026 current_release