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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_033562
Query referenceOH1004
LocationChr07:47642024-47643801 (+)
DescriptionSimilar to CKB1: Casein kinase II subunit beta-1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_033562 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 14 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g47080 Plays a complex role in regulating the basal catalytic activity of the alpha subunit.
Reconstitution of Arabidopsis casein kinase II from recombinant subunits and phosphorylation of transcription factor GBF1.1995 · DOI: 10.1105/tpc.7.1.105
At2g44680 Plays a complex role in regulating the basal catalytic activity of the alpha subunit. No verified direct reference in this release
At4g17640 Plays a complex role in regulating the basal catalytic activity of the alpha subunit. No verified direct reference in this release
At3g60250 Plays a complex role in regulating the basal catalytic activity of the alpha subunit.
Protein kinase CK2 interacts with and phosphorylates the Arabidopsis circadian clock-associated 1 protein.1998 · DOI: 10.1073/pnas.95.18.11020

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006468protein phosphorylationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.841; coverage=101.003; evalue=2.95e-158; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007623circadian rhythmBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.617; coverage=92.642; evalue=3.66e-156; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010017red or far-red light signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.841; coverage=101.003; evalue=2.95e-158; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016055Wnt signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.333; coverage=64.214; evalue=1.02e-83; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042752regulation of circadian rhythmBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=72.76; coverage=93.311; evalue=1.35e-144; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042753positive regulation of circadian rhythmBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.617; coverage=92.642; evalue=3.66e-156; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048573photoperiodism, floweringBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.617; coverage=92.642; evalue=3.66e-156; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.841; coverage=101.003; evalue=2.95e-158; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.841; coverage=101.003; evalue=2.95e-158; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.841; coverage=101.003; evalue=2.95e-158; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005956protein kinase CK2 complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.841; coverage=101.003; evalue=2.95e-158; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004674protein serine/threonine kinase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.617; coverage=92.642; evalue=3.66e-156; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019887protein kinase regulator activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.841; coverage=101.003; evalue=2.95e-158; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.333; coverage=64.214; evalue=1.02e-83; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G44680KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=77.617; coverage=92.642; evalue=3.66e-156UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G60250KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=72.76; coverage=93.311; evalue=1.35e-144UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT4G17640KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=70.0; coverage=100.334; evalue=1.62e-151UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G47080KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=73.841; coverage=101.003; evalue=2.95e-158UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdre:30428KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=58.333; coverage=64.214; evalue=1.02e-83UniProtKB/Swiss-Prot DAT 2026 current_release