RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDLXL04_033334
Query referenceOH1004
LocationChr07:40993153-40994128 (+)
DescriptionSimilar to MYB305: Myb-related protein 305 (Antirrhinum majus OX%3D4151)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_033334 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 27 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g59780 Transcription factor. No verified direct reference in this release
At3g27810 Transcription factor involved in photomorphogenesis in the light.
Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling.2006 · DOI: 10.1111/j.1365-313x.2006.02756.x
MYB108 acts together with MYB24 to regulate jasmonate-mediated stamen maturation in Arabidopsis.2009 · DOI: 10.1104/pp.108.132597
Gibberellin acts through jasmonate to control the expression of MYB21, MYB24, and MYB57 to promote stamen filament growth in Arabidopsis.2009 · DOI: 10.1371/journal.pgen.1000440
The Jasmonate-ZIM domain proteins interact with the R2R3-MYB transcription factors MYB21 and MYB24 to affect Jasmonate-regulated stamen development in Arabidopsis.2011 · DOI: 10.1105/tpc.111.083089

Rice

Reference gene IDPossible functionPapers / DOI
Os03g0315400 Transcription factor involved in abiotic stress responses.
A R2R3-type MYB gene, OsMYB2, is involved in salt, cold, and dehydration tolerance in rice.2012 · DOI: 10.1093/jxb/err431

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.0; coverage=88.496; evalue=7.16e-50; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.192; coverage=46.018; evalue=2.3e-49; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007623circadian rhythmBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.0; coverage=88.496; evalue=7.16e-50; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009409response to coldBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.593; coverage=47.788; evalue=4.99e-49; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009585red, far-red light phototransductionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.355; coverage=47.345; evalue=1.1e-48; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009740gibberellic acid mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.355; coverage=47.345; evalue=1.1e-48; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009753response to jasmonic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.355; coverage=47.345; evalue=1.1e-48; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009867jasmonic acid mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.355; coverage=47.345; evalue=1.1e-48; UniProt GO evidence=IEP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009909regulation of flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.608; coverage=45.133; evalue=3.37e-49; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010468regulation of gene expressionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.608; coverage=45.133; evalue=3.37e-49; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010597green leaf volatile biosynthetic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.0; coverage=88.496; evalue=7.16e-50; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035865cellular response to potassium ionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.192; coverage=46.018; evalue=2.3e-49; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043266regulation of potassium ion transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.192; coverage=46.018; evalue=2.3e-49; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045893positive regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.593; coverage=47.788; evalue=4.99e-49; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0048443stamen developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.355; coverage=47.345; evalue=1.1e-48; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080086stamen filament developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.355; coverage=47.345; evalue=1.1e-48; UniProt GO evidence=IGI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0080187floral organ senescenceBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.608; coverage=45.133; evalue=3.37e-49; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1901002positive regulation of response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.593; coverage=47.788; evalue=4.99e-49; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1902584positive regulation of response to water deprivationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.593; coverage=47.788; evalue=4.99e-49; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1903338regulation of cell wall organization or biogenesisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.608; coverage=45.133; evalue=3.37e-49; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000762regulation of phenylpropanoid metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.0; coverage=88.496; evalue=7.16e-50; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.0; coverage=88.496; evalue=7.16e-50; UniProt GO evidence=IEA:UniProtKB-SubCellUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009505plant-type cell wallCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=69.608; coverage=45.133; evalue=3.37e-49; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.0; coverage=88.496; evalue=7.16e-50; UniProt GO evidence=IEA:UniProtKB-ARBAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003700DNA-binding transcription factor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=44.0; coverage=88.496; evalue=7.16e-50; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0043565sequence-specific DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.192; coverage=46.018; evalue=2.3e-49; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1990841promoter-specific chromatin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.355; coverage=47.345; evalue=1.1e-48; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G27810KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.355; coverage=47.345; evalue=1.1e-48UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G59780KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=70.192; coverage=46.018; evalue=2.3e-49UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0315400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=67.593; coverage=47.788; evalue=4.99e-49UniProtKB/Swiss-Prot DAT 2026 current_release