Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_033074`
Query reference	OH1004
Location	Chr07:35447728-35450179 (-)
Description	Similar to GRIK2: Serine/threonine-protein kinase GRIK2 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_033074 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 22 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g60550`	Activates SnRK1.1/KIN10 and SnRK1.2/KIN11 by phosphorylation of their activation-loop 'Thr-198' and 'Thr-176', respectively.	Geminivirus infection up-regulates the expression of two Arabidopsis protein kinases related to yeast SNF1- and mammalian AMPK-activating kinases.2006 · DOI: 10.1104/pp.106.088476 DNA sequences from Arabidopsis, which encode protein kinases and function as upstream regulators of Snf1 in yeast.2007 · DOI: 10.1074/jbc.m611244200 Arabidopsis protein kinases GRIK1 and GRIK2 specifically activate SnRK1 by phosphorylating its activation loop.2009 · DOI: 10.1104/pp.108.132787 Cross-phosphorylation between Arabidopsis thaliana sucrose nonfermenting 1-related protein kinase 1 (AtSnRK1) and its activating kinase (AtSnAK) determines their catalytic activities.2010 · DOI: 10.1074/jbc.m109.079194
`At3g45240`	Activates SnRK1.1/KIN10 and SnRK1.2/KIN11 by phosphorylation of their activation-loop 'Thr-198' and 'Thr-176', respectively.	Geminivirus infection up-regulates the expression of two Arabidopsis protein kinases related to yeast SNF1- and mammalian AMPK-activating kinases.2006 · DOI: 10.1104/pp.106.088476 DNA sequences from Arabidopsis, which encode protein kinases and function as upstream regulators of Snf1 in yeast.2007 · DOI: 10.1074/jbc.m611244200 Arabidopsis protein kinases GRIK1 and GRIK2 specifically activate SnRK1 by phosphorylating its activation loop.2009 · DOI: 10.1104/pp.108.132787 Cross-phosphorylation between Arabidopsis thaliana sucrose nonfermenting 1-related protein kinase 1 (AtSnRK1) and its activating kinase (AtSnAK) determines their catalytic activities.2010 · DOI: 10.1074/jbc.m109.079194

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006468	protein phosphorylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.304; coverage=95.411; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009615	response to virus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.304; coverage=95.411; evalue=0.0; UniProt GO evidence=IEP:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032147	activation of protein kinase activity	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.662; coverage=74.396; evalue=7.94e-56; UniProt GO evidence=ISO:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0035556	intracellular signal transduction	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.304; coverage=95.411; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045860	positive regulation of protein kinase activity	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.662; coverage=74.396; evalue=7.94e-56; UniProt GO evidence=ISO:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0046777	protein autophosphorylation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.628; coverage=100.0; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0061762	CAMKK-AMPK signaling cascade	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.966; coverage=70.048; evalue=9.92e-56; UniProt GO evidence=ISO:RGD	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:1903599	positive regulation of autophagy of mitochondrion	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.966; coverage=70.048; evalue=9.92e-56; UniProt GO evidence=ISO:RGD	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.304; coverage=95.411; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005654	nucleoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.662; coverage=74.396; evalue=7.94e-56; UniProt GO evidence=TAS:Reactome	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.304; coverage=95.411; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.662; coverage=74.396; evalue=7.94e-56; UniProt GO evidence=TAS:Reactome	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005886	plasma membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.628; coverage=100.0; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004672	protein kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.304; coverage=95.411; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004674	protein serine/threonine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.304; coverage=95.411; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0004683	calcium/calmodulin-dependent protein kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.662; coverage=74.396; evalue=7.94e-56; UniProt GO evidence=ISS:MGI	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005509	calcium ion binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.966; coverage=70.048; evalue=9.92e-56; UniProt GO evidence=ISS:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005516	calmodulin binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.662; coverage=74.396; evalue=7.94e-56; UniProt GO evidence=ISO:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005524	ATP binding	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.304; coverage=95.411; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016301	kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.304; coverage=95.411; evalue=0.0; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0030295	protein kinase activator activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.966; coverage=70.048; evalue=9.92e-56; UniProt GO evidence=TAS:RGD	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0106310	protein serine kinase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.304; coverage=95.411; evalue=0.0; UniProt GO evidence=IEA:RHEA	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G45240	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=60.628; coverage=100.0; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G60550	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=64.304; coverage=95.411; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ddi:DDB_G0279405	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=42.308; coverage=69.082; evalue=1.52e-65	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	mmu:55984	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=37.662; coverage=74.396; evalue=7.94e-56	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	rno:83506	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.966; coverage=70.048; evalue=9.92e-56	UniProtKB/Swiss-Prot DAT 2026 current_release