Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_032723`
Query reference	OH1004
Location	Chr07:28309663-28313556 (+)
Description	Similar to PAH1: Phosphatidate phosphatase PAH1 (Arabidopsis thaliana OX%3D3702)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_032723 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 17 GO annotations and 2 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At3g09560`	Magnesium-dependent phosphatidate phosphatase which catalyzes the dephosphorylation of phosphatidate to yield diacylglycerol.	Arabidopsis lipins mediate eukaryotic pathway of lipid metabolism and cope critically with phosphate starvation.2009 · DOI: 10.1073/pnas.0907173106 Phosphatidic acid phosphohydrolase 1 and 2 regulate phospholipid synthesis at the endoplasmic reticulum in Arabidopsis.2010 · DOI: 10.1105/tpc.109.071423 Lipins from plants are phosphatidate phosphatases that restore lipid synthesis in a pah1Δ mutant strain of Saccharomyces cerevisiae.2011 · DOI: 10.1111/j.1742-4658.2010.07995.x
`At5g42870`	Magnesium-dependent phosphatidate phosphatase which catalyzes the dephosphorylation of phosphatidate to yield diacylglycerol.	Arabidopsis lipins mediate eukaryotic pathway of lipid metabolism and cope critically with phosphate starvation.2009 · DOI: 10.1073/pnas.0907173106 Phosphatidic acid phosphohydrolase 1 and 2 regulate phospholipid synthesis at the endoplasmic reticulum in Arabidopsis.2010 · DOI: 10.1105/tpc.109.071423

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0006629	lipid metabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=112.255; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006886	intracellular protein transport	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=112.255; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008654	phospholipid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=112.255; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009062	fatty acid catabolic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.681; coverage=52.206; evalue=2.78e-77; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016036	cellular response to phosphate starvation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=112.255; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019375	galactolipid biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=112.255; evalue=0.0; UniProt GO evidence=IGI:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0019432	triglyceride biosynthetic process	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.681; coverage=52.206; evalue=2.78e-77; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032869	cellular response to insulin stimulus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.681; coverage=52.206; evalue=2.78e-77; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0045944	positive regulation of transcription by RNA polymerase II	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.681; coverage=52.206; evalue=2.78e-77; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000139	Golgi membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=112.255; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=112.255; evalue=0.0; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=112.255; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016020	membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.113; coverage=49.755; evalue=2.59e-161; UniProt GO evidence=IEA:GOC	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032586	protein storage vacuole membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=112.255; evalue=0.0; UniProt GO evidence=IDA:UniProtKB	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048046	apoplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.113; coverage=49.755; evalue=2.59e-161; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0003713	transcription coactivator activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=35.681; coverage=52.206; evalue=2.78e-77; UniProt GO evidence=IEA:TreeGrafter	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0008195	phosphatidate phosphatase activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=112.255; evalue=0.0; UniProt GO evidence=IBA:GO_Central	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G09560	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=50.0; coverage=112.255; evalue=0.0	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G42870	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=59.113; coverage=49.755; evalue=2.59e-161	UniProtKB/Swiss-Prot DAT 2026 current_release