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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Search Results

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Gene IDLXL04_032672
Query referenceOH1004
LocationChr07:27554195-27559258 (-)
DescriptionSimilar to MOM1: Helicase protein MOM1 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_032672 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 70 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g08060 Together with PIAL1 and PIAL2, regulates transcriptional gene silencing (TGS) independently of changes in DNA methylation.
At5g44800 Chromatin-remodeling protein that binds DNA through histones and regulates gene transcription. No verified direct reference in this release

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0000122negative regulation of transcription by RNA polymerase IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000724double-strand break repair via homologous recombinationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IMP:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000729DNA double-strand break processingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IMP:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0001178regulation of transcriptional start site selection at RNA polymerase II promoterBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IGI:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006335DNA replication-dependent chromatin assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.226; coverage=46.116; evalue=3.46e-31; UniProt GO evidence=IMP:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006337nucleosome disassemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.226; coverage=46.116; evalue=3.46e-31; UniProt GO evidence=EXP:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006338chromatin remodelingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.002; coverage=52.802; evalue=2.3e-35; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006351DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006355regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=NAS:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006357regulation of transcription by RNA polymerase IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IDA:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006363termination of RNA polymerase I transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IGI:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006368transcription elongation by RNA polymerase IIBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IGI:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006369termination of RNA polymerase II transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IMP:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007051spindle organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007062sister chromatid cohesionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IMP:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0007098centrosome cycleBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010468regulation of gene expressionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IMP:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031047regulatory ncRNA-mediated gene silencingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031507heterochromatin formationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IEA:InterProUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034080CENP-A containing chromatin assemblyBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.226; coverage=46.116; evalue=3.46e-31; UniProt GO evidence=IMP:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0034728nucleosome organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IMP:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042659regulation of cell fate specificationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042742defense response to bacteriumBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045814negative regulation of gene expression, epigeneticBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045815transcription initiation-coupled chromatin remodelingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.226; coverage=46.116; evalue=3.46e-31; UniProt GO evidence=EXP:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045892negative regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0045893positive regulation of DNA-templated transcriptionBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0060966regulation of gene silencing by regulatory ncRNABiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140673transcription elongation-coupled chromatin remodelingBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.226; coverage=46.116; evalue=3.46e-31; UniProt GO evidence=TAS:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1902275regulation of chromatin organizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IMP:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000104negative regulation of DNA-templated DNA replicationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IGI:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:2000736regulation of stem cell differentiationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=NAS:ComplexPortalUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000124SAGA complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IDA:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000779condensed chromosome, centromeric regionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.226; coverage=46.116; evalue=3.46e-31; UniProt GO evidence=IDA:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000785chromatinCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.002; coverage=52.802; evalue=2.3e-35; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005654nucleoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=IDA:HPAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005730nucleolusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=IDA:HPAUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005739mitochondrionCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=HDA:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005813centrosomeCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.002; coverage=52.802; evalue=2.3e-35; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016581NuRD complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030874nucleolar chromatinCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IDA:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0035861site of double-strand breakCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IDA:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042735endosperm protein bodyCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.002; coverage=52.802; evalue=2.3e-35; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046695SLIK (SAGA-like) complexCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IDA:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0061638CENP-A containing chromatinCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.226; coverage=46.116; evalue=3.46e-31; UniProt GO evidence=IDA:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000182rDNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IDA:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000976transcription cis-regulatory region bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003677DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.002; coverage=52.802; evalue=2.3e-35; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003682chromatin bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.002; coverage=52.802; evalue=2.3e-35; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0003723RNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35; UniProt GO evidence=HDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0004386helicase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005524ATP bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008094ATP-dependent activity, acting on DNAMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IDA:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008270zinc ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.002; coverage=52.802; evalue=2.3e-35; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016787hydrolase activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0016887ATP hydrolysis activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.002; coverage=52.802; evalue=2.3e-35; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0031490chromatin DNA bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IDA:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0032183SUMO bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IPI:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042393histone bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.002; coverage=52.802; evalue=2.3e-35; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042802identical protein bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042803protein homodimerization activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0046872metal ion bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:00515372 iron, 2 sulfur cluster bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51; UniProt GO evidence=IEA:UniProtKB-KWUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140002histone H3K4me3 reader activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IDA:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140658ATP-dependent chromatin remodeler activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.002; coverage=52.802; evalue=2.3e-35; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140713histone chaperone activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.226; coverage=46.116; evalue=3.46e-31; UniProt GO evidence=NAS:PomBaseUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0140750nucleosome array spacer activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32; UniProt GO evidence=IMP:SGDUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G08060KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=36.436; coverage=36.971; evalue=9.38e-51UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G44800KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=27.002; coverage=52.802; evalue=2.3e-35UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGhsa:1107KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=26.394; coverage=52.901; evalue=9.08e-35UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGsce:YER164WKEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=25.738; coverage=46.608; evalue=5.34e-32UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGspo:2542363KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=26.226; coverage=46.116; evalue=3.46e-31UniProtKB/Swiss-Prot DAT 2026 current_release