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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_032251
Query referenceOH1004
LocationChr07:19246985-19249177 (+)
DescriptionSimilar to CAX2: Vacuolar cation/proton exchanger 2 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_032251 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 8 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g13320 Vacuolar cation/proton exchanger (CAX).
Manganese specificity determinants in the Arabidopsis metal/H+ antiporter CAX2.2003 · DOI: 10.1074/jbc.m209952200
At1g55730 Vacuolar cation/proton exchanger (CAX). No verified direct reference in this release
At1g55720 Vacuolar cation/proton exchanger (CAX). No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os03g0397400 Vacuolar cation/proton exchanger (CAX).
Expression profile of the genes for rice cation/H+ exchanger family and functional analysis in yeast.2005 · DOI: 10.1093/pcp/pci173
Os04g0653200 Vacuolar cation/proton exchanger (CAX).
Expression profile of the genes for rice cation/H+ exchanger family and functional analysis in yeast.2005 · DOI: 10.1093/pcp/pci173

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0006816calcium ion transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.322; coverage=91.164; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0006874intracellular calcium ion homeostasisBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.912; coverage=97.414; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030001metal ion transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.322; coverage=91.164; evalue=0.0; UniProt GO evidence=IMP:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0070588calcium ion transmembrane transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.912; coverage=97.414; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005773vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.322; coverage=91.164; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009705plant-type vacuole membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.912; coverage=97.414; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0012505endomembrane systemCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.322; coverage=91.164; evalue=0.0; UniProt GO evidence=TAS:TIGRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015369calcium:proton antiporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.912; coverage=97.414; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G55720KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=66.83; coverage=87.716; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G55730KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=66.213; coverage=95.043; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G13320KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=68.322; coverage=91.164; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os03g0397400KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=69.912; coverage=97.414; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os04g0653200KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=71.883; coverage=88.147; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release