Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene ID	`LXL04_031729`
Query reference	OH1004
Location	Chr07:10349156-10349620 (+)
Description	Similar to MAF1: MFP1 attachment factor 1 (Solanum lycopersicum OX%3D4081)
Annotation source assembly	GCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_031729 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 18 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g43070`	Regulates the mitotic activity in roots.	Arabidopsis WPP-domain proteins are developmentally associated with the nuclear envelope and promote cell division.2004 · DOI: 10.1105/tpc.104.026740 WPP-domain proteins mimic the activity of the HSC70-1 chaperone in preventing mistargeting of RanGAP1-anchoring protein WIT1.2009 · DOI: 10.1104/pp.109.143404
`At1g47200`	Regulates the mitotic activity in roots.	Arabidopsis WPP-domain proteins are developmentally associated with the nuclear envelope and promote cell division.2004 · DOI: 10.1105/tpc.104.026740 WPP-domain proteins mimic the activity of the HSC70-1 chaperone in preventing mistargeting of RanGAP1-anchoring protein WIT1.2009 · DOI: 10.1104/pp.109.143404
`At5g27940`	Regulates the mitotic activity in roots.	No verified direct reference in this release
`At3g63130`	GTPase activator for the nuclear Ras-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state.	Plant RanGAPs are localized at the nuclear envelope in interphase and associated with microtubules in mitotic cells.2002 · DOI: 10.1046/j.1365-313x.2002.01324.x RanGAP1 is a continuous marker of the Arabidopsis cell division plane.2008 · DOI: 10.1073/pnas.0806157105

Rice

No hit for this species in the current source table.

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

Type	ID	Name	Namespace	Evidence	Source
GO	GO:0000278	mitotic cell cycle	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.551; coverage=69.481; evalue=5.45e-38; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0000911	cytokinesis by cell plate formation	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.0; coverage=64.935; evalue=3.66e-15; UniProt GO evidence=IMP:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0006606	protein import into nucleus	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.0; coverage=64.935; evalue=3.66e-15; UniProt GO evidence=TAS:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0048527	lateral root development	Biological Process	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.551; coverage=69.481; evalue=5.45e-38; UniProt GO evidence=IEA:InterPro	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005634	nucleus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.273; coverage=71.429; evalue=3.12e-34; UniProt GO evidence=ISM:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005635	nuclear envelope	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.551; coverage=69.481; evalue=5.45e-38; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005640	nuclear outer membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.273; coverage=71.429; evalue=3.12e-34; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005737	cytoplasm	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.81; coverage=68.182; evalue=1.84e-21; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005794	Golgi apparatus	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.551; coverage=69.481; evalue=5.45e-38; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005819	spindle	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.0; coverage=64.935; evalue=3.66e-15; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005829	cytosol	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.0; coverage=64.935; evalue=3.66e-15; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009504	cell plate	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.0; coverage=64.935; evalue=3.66e-15; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009524	phragmoplast	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.0; coverage=64.935; evalue=3.66e-15; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0009536	plastid	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.273; coverage=71.429; evalue=3.12e-34; UniProt GO evidence=HDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0016363	nuclear matrix	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.551; coverage=69.481; evalue=5.45e-38; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0031965	nuclear membrane	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.0; coverage=64.935; evalue=3.66e-15; UniProt GO evidence=IEA:UniProtKB-SubCell	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0032153	cell division site	Cellular Component	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.0; coverage=64.935; evalue=3.66e-15; UniProt GO evidence=IDA:TAIR	UniProtKB/Swiss-Prot DAT 2026 current_release
GO	GO:0005096	GTPase activator activity	Molecular Function	Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.0; coverage=64.935; evalue=3.66e-15; UniProt GO evidence=IEA:UniProtKB-KW	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT1G47200	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=54.808; coverage=67.532; evalue=6.13e-31	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT3G63130	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=38.0; coverage=64.935; evalue=3.66e-15	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G27940	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=43.81; coverage=68.182; evalue=1.84e-21	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	ath:AT5G43070	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=57.273; coverage=71.429; evalue=3.12e-34	UniProtKB/Swiss-Prot DAT 2026 current_release
KEGG	sly:543586	KEGG gene cross-reference from reviewed UniProt hit; pathway name pending		Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=63.551; coverage=69.481; evalue=5.45e-38	UniProtKB/Swiss-Prot DAT 2026 current_release