RubberDandelionOmics Rubber Dandelion Multi-omics Website
More
Transcriptome Expression Annotation Rubber Pathway TF Prediction Targets Protein Network Resequencing Tools Downloads
ZH EN

How to use this page

Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

Download current result

Gene IDLXL04_031689
Query referenceOH1004
LocationChr07:9555319-9557520 (+)
DescriptionSimilar to REM4.1: Remorin 4.1 (Oryza sativa subsp. japonica OX%3D39947)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_031689 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 17 GO annotations and 4 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g57540 Collaborates with REM4.2 to positively regulate the BCTV and BSCTV susceptibility.
Arabidopsis thaliana Remorins Interact with SnRK1 and Play a Role in Susceptibility to Beet Curly Top Virus and Beet Severe Curly Top Virus.2014 · DOI: 10.5423/ppj.oa.06.2014.0061
At2g41870 Collaborates with REM4.1 to positively regulate the BCTV and BSCTV susceptibility. No verified direct reference in this release
At3g61260 Uncharacterized protein At3g61260. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os07g0569100 Functions in abscisic acid (ABA) signaling downstream of BZIP23.
OsREM4.1 Interacts with OsSERK1 to Coordinate the Interlinking between Abscisic Acid and Brassinosteroid Signaling in Rice.2016 · DOI: 10.1016/j.devcel.2016.06.011

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0009414response to water deprivationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.247; coverage=13.748; evalue=4.07e-06; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009651response to salt stressBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.247; coverage=13.748; evalue=4.07e-06; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009737response to abscisic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.247; coverage=13.748; evalue=4.07e-06; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009738abscisic acid-activated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.554; coverage=15.631; evalue=3.02e-07; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009751response to salicylic acidBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.951; coverage=19.397; evalue=3.38e-06; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0010555response to mannitolBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.247; coverage=13.748; evalue=4.07e-06; UniProt GO evidence=IEP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051607defense response to virusBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.951; coverage=19.397; evalue=3.38e-06; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051665membrane raft localizationBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.951; coverage=19.397; evalue=3.38e-06; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:1900458negative regulation of brassinosteroid mediated signaling pathwayBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.554; coverage=15.631; evalue=3.02e-07; UniProt GO evidence=IMP:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0000325plant-type vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.951; coverage=19.397; evalue=3.38e-06; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.247; coverage=13.748; evalue=4.07e-06; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.951; coverage=19.397; evalue=3.38e-06; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005829cytosolCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.951; coverage=19.397; evalue=3.38e-06; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.554; coverage=15.631; evalue=3.02e-07; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009506plasmodesmaCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.951; coverage=19.397; evalue=3.38e-06; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0019900kinase bindingMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.247; coverage=13.748; evalue=4.07e-06; UniProt GO evidence=IPI:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0030547signaling receptor inhibitor activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.554; coverage=15.631; evalue=3.02e-07; UniProt GO evidence=IDA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT2G41870KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=33.721; coverage=16.196; evalue=5.03e-06UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G57540KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=3; identity=34.247; coverage=13.748; evalue=4.07e-06UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT3G61260KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=2; identity=34.951; coverage=19.397; evalue=3.38e-06UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGdosa:Os07g0569100KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=38.554; coverage=15.631; evalue=3.02e-07UniProtKB/Swiss-Prot DAT 2026 current_release