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Gene Annotation

Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.

Examples TkA01G624900 LXL04_000258 Reference examples LXL04_039733 TkAUNG001940

Search Results

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Gene IDLXL04_031088
Query referenceOH1004
LocationChr07:292287-295634 (+)
DescriptionSimilar to SUC4: Sucrose transport protein SUC4 (Arabidopsis thaliana OX%3D3702)
Annotation source assemblyGCA_047496595.1_OSU_TarKok_2.0

Functional annotation source: OH1004 · LXL04_031088 · GCA_047496595.1_OSU_TarKok_2.0.

This query returns 17 GO annotations and 3 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.

Arabidopsis / Rice Reference Genes and Papers

Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g09960 Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system).
A new subfamily of sucrose transporters, SUT4, with low affinity/high capacity localized in enucleate sieve elements of plants.2000 · DOI: 10.1105/tpc.12.8.1345
At1g22710 Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system).
Genetic evidence for the in planta role of phloem-specific plasma membrane sucrose transporters.2000 · DOI: 10.1073/pnas.250473797
Substrate specificity of the Arabidopsis thaliana sucrose transporter AtSUC2.2003 · DOI: 10.1074/jbc.m308490200
SUC1 and SUC2: two sucrose transporters from Arabidopsis thaliana; expression and characterization in baker's yeast and identification of the histidine-tagged protein.1994 · DOI: 10.1046/j.1365-313x.1994.6010067.x
At5g06170 High-affinity sucrose transporter.
AtSUC8 and AtSUC9 encode functional sucrose transporters, but the closely related AtSUC6 and AtSUC7 genes encode aberrant proteins in different Arabidopsis ecotypes.2004 · DOI: 10.1111/j.1365-313x.2004.02196.x
Arabidopsis sucrose transporter AtSUC9. High-affinity transport activity, intragenic control of expression, and early flowering mutant phenotype.2007 · DOI: 10.1104/pp.106.089003

Rice

Reference gene IDPossible functionPapers / DOI
UniProt: A2ZN77 Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). No verified direct reference in this release
Os12g0641400 Responsible for the transport of sucrose into the cell, with the concomitant uptake of protons (symport system). No verified direct reference in this release

GO / KEGG

These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.

TypeIDNameNamespaceEvidenceSource
GOGO:0005985sucrose metabolic processBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.139; coverage=101.826; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-UniPathwayUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009908flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.795; coverage=98.986; evalue=4.34e-168; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009909regulation of flower developmentBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.795; coverage=98.986; evalue=4.34e-168; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0015768maltose transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.795; coverage=98.986; evalue=4.34e-168; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042946glucoside transportBiological ProcessSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.795; coverage=98.986; evalue=4.34e-168; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005634nucleusCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.515; coverage=98.377; evalue=1.74e-175; UniProt GO evidence=HDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005737cytoplasmCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.515; coverage=98.377; evalue=1.74e-175; UniProt GO evidence=ISM:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005773vacuoleCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.139; coverage=101.826; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005801cis-Golgi networkCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.139; coverage=101.826; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005886plasma membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.139; coverage=101.826; evalue=0.0; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0009705plant-type vacuole membraneCellular ComponentSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.139; coverage=101.826; evalue=0.0; UniProt GO evidence=IEA:EnsemblPlantsUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0005364maltose:proton symporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.795; coverage=98.986; evalue=4.34e-168; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008506sucrose:proton symporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.139; coverage=101.826; evalue=0.0; UniProt GO evidence=IBA:GO_CentralUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0008515sucrose transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.139; coverage=101.826; evalue=0.0; UniProt GO evidence=IMP:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042950salicin transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.795; coverage=98.986; evalue=4.34e-168; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0042951arbutin transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.795; coverage=98.986; evalue=4.34e-168; UniProt GO evidence=IDA:UniProtKBUniProtKB/Swiss-Prot DAT 2026 current_release
GOGO:0051119sugar transmembrane transporter activityMolecular FunctionSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.795; coverage=98.986; evalue=4.34e-168; UniProt GO evidence=IDA:TAIRUniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G09960KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=1; identity=65.139; coverage=101.826; evalue=0.0UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT1G22710KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=4; identity=50.515; coverage=98.377; evalue=1.74e-175UniProtKB/Swiss-Prot DAT 2026 current_release
KEGGath:AT5G06170KEGG gene cross-reference from reviewed UniProt hit; pathway name pendingSwiss-Prot reviewed homolog transfer; hit_rank=5; identity=49.795; coverage=98.986; evalue=4.34e-168UniProtKB/Swiss-Prot DAT 2026 current_release