Gene Annotation
Shows the current gene functional description, GO annotations, and KEGG cross-references. Functional annotations retain the source reference; direct Arabidopsis/rice sequence hits are shown separately.
Search Results
| Gene ID | LXL04_030855 |
|---|---|
| Query reference | OH1004 |
| Location | Chr06:124202766-124206246 (+) |
| Description | Similar to ATG3: Autophagy-related protein 3 (Arabidopsis thaliana OX%3D3702) |
| Annotation source assembly | GCA_047496595.1_OSU_TarKok_2.0 |
Functional annotation source: OH1004 · LXL04_030855 · GCA_047496595.1_OSU_TarKok_2.0.
This query returns 22 GO annotations and 5 KEGG gene cross-references from the OH1004 annotation record. The download is scoped to this query; these records do not establish KEGG pathway membership.
Arabidopsis / Rice Reference Genes and Papers
Papers describe Arabidopsis or rice reference genes. Functional links to rubber dandelion are based on protein alignments from the queried assembly.
Download references for this gene
Arabidopsis
| Reference gene ID | Possible function | Papers / DOI |
|---|---|---|
At5g61500 |
E2 conjugating enzyme responsible for the E2-like covalent binding of phosphatidylethanolamine to the C-terminal Gly of ATG8. | No verified direct reference in this release |
Rice
No hit for this species in the current source table.
GO / KEGG
These GO/KEGG records retain the OH1004 annotation source and original transfer evidence/coverage. Their source-species scope differs from the direct Arabidopsis/rice alignment table.
| Type | ID | Name | Namespace | Evidence | Source |
|---|---|---|---|---|---|
| GO | GO:0000045 | autophagosome assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.847; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000422 | autophagy of mitochondrion | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.847; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006612 | protein targeting to membrane | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.148; coverage=94.586; evalue=3.68e-81; UniProt GO evidence=ISS:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0006914 | autophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0015031 | protein transport | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.847; coverage=100.0; evalue=0.0; UniProt GO evidence=IEA:UniProtKB-KW | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016236 | macroautophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0016567 | protein ubiquitination | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0044804 | nucleophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.847; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0050765 | negative regulation of phagocytosis | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=IMP:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0061723 | glycophagy | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.847; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:1902017 | regulation of cilium assembly | Biological Process | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000153 | cytoplasmic ubiquitin ligase complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0000407 | phagophore assembly site | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.847; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005737 | cytoplasm | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.847; coverage=100.0; evalue=0.0; UniProt GO evidence=ISM:TAIR | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005829 | cytosol | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.847; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0005886 | plasma membrane | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0034274 | Atg12-Atg5-Atg16 complex | Cellular Component | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019776 | Atg8-family ligase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=IMP:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019777 | Atg12 transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=IDA:UniProtKB | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019787 | ubiquitin-like protein transferase activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=ISO:MGI | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0019899 | enzyme binding | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83; UniProt GO evidence=ISO:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| GO | GO:0141046 | Atg8-family conjugating enzyme activity | Molecular Function | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.847; coverage=100.0; evalue=0.0; UniProt GO evidence=IBA:GO_Central | UniProtKB/Swiss-Prot DAT 2026 current_release |
| KEGG | ath:AT5G61500 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=1; identity=81.847; coverage=100.0; evalue=0.0 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | bta:508571 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=5; identity=48.288; coverage=92.994; evalue=4.77e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | ddi:DDB_G0277319 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=2; identity=46.269; coverage=106.688; evalue=3.95e-91 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | hsa:64422 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=4; identity=48.148; coverage=94.586; evalue=3.68e-81 | UniProtKB/Swiss-Prot DAT 2026 current_release | |
| KEGG | mmu:67841 | KEGG gene cross-reference from reviewed UniProt hit; pathway name pending | Swiss-Prot reviewed homolog transfer; hit_rank=3; identity=48.973; coverage=92.994; evalue=8.51e-83 | UniProtKB/Swiss-Prot DAT 2026 current_release |